Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 AP005212.1-201ENST00000581547 1997 ntBASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 AC092667.1-201ENST00000434301 2586 ntBASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 AC073314.1-201ENST00000568729 2216 ntBASIC20.72■□□□□ 0.91
ZC3HC1Q86WB0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 AP004607.4-201ENST00000530158 1459 ntBASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZC3HC1Q86WB0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3HC1Q86WB0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3HC1Q86WB0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3HC1Q86WB0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 AC007225.1-201ENST00000566331 1836 ntBASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 AC079140.4-201ENST00000507448 529 ntBASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms