Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RXRGP48443 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RXRGP48443 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.79■□□□□ 0.92
RXRGP48443 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.79■□□□□ 0.92
RXRGP48443 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.79■□□□□ 0.92
RXRGP48443 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.79■□□□□ 0.92
RXRGP48443 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
RXRGP48443 AC069236.1-201ENST00000604339 616 ntBASIC20.79■□□□□ 0.92
RXRGP48443 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.79■□□□□ 0.92
RXRGP48443 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.79■□□□□ 0.92
RXRGP48443 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RXRGP48443 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
RXRGP48443 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RXRGP48443 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.78■□□□□ 0.92
RXRGP48443 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.78■□□□□ 0.92
RXRGP48443 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RXRGP48443 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.78■□□□□ 0.92
RXRGP48443 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RXRGP48443 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
RXRGP48443 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
RXRGP48443 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.78■□□□□ 0.92
RXRGP48443 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
RXRGP48443 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.77■□□□□ 0.92
RXRGP48443 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.77■□□□□ 0.92
RXRGP48443 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.77■□□□□ 0.92
RXRGP48443 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.77■□□□□ 0.92
RXRGP48443 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.77■□□□□ 0.92
RXRGP48443 AC092118.2-201ENST00000613495 667 ntBASIC20.77■□□□□ 0.92
RXRGP48443 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.77■□□□□ 0.92
RXRGP48443 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RXRGP48443 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RXRGP48443 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.77■□□□□ 0.92
RXRGP48443 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RXRGP48443 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RXRGP48443 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RXRGP48443 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.77■□□□□ 0.91
RXRGP48443 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RXRGP48443 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
RXRGP48443 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 AC087742.1-201ENST00000575880 1738 ntBASIC20.76■□□□□ 0.91
RXRGP48443 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.76■□□□□ 0.91
RXRGP48443 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RXRGP48443 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RXRGP48443 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.76■□□□□ 0.91
RXRGP48443 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.76■□□□□ 0.91
RXRGP48443 AL162412.1-201ENST00000567129 965 ntBASIC20.76■□□□□ 0.91
RXRGP48443 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.76■□□□□ 0.91
RXRGP48443 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.76■□□□□ 0.91
RXRGP48443 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.76■□□□□ 0.91
RXRGP48443 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RXRGP48443 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms