Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 KRT17P6-201ENST00000453795 1220 ntBASIC8.75□□□□□ -1.01
MACF1Q9UPN3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 AC244107.1-201ENST00000442033 332 ntBASIC8.75□□□□□ -1.01
MACF1Q9UPN3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 SLC6A10P-202ENST00000431994 2058 ntBASIC8.75□□□□□ -1.01
MACF1Q9UPN3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AC139887.4-201ENST00000607877 719 ntBASIC8.74□□□□□ -1.01
MACF1Q9UPN3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FITM1-202ENST00000559294 800 ntBASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 FAM197Y1-201ENST00000421178 764 ntBASIC8.74□□□□□ -1.01
MACF1Q9UPN3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AL591742.1-201ENST00000604433 565 ntBASIC8.74□□□□□ -1.01
MACF1Q9UPN3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MACF1Q9UPN3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 FAM8A6P-201ENST00000407496 1135 ntBASIC8.73□□□□□ -1.01
MACF1Q9UPN3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 LIN28AP1-201ENST00000429574 405 ntBASIC8.73□□□□□ -1.01
MACF1Q9UPN3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 FXN-202ENST00000396364 980 ntTSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 FAM86EP-206ENST00000510506 987 ntBASIC8.73□□□□□ -1.01
MACF1Q9UPN3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 AC012313.10-201ENST00000623509 926 ntBASIC8.73□□□□□ -1.01
MACF1Q9UPN3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC8.73□□□□□ -1.01
MACF1Q9UPN3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms