Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A13Q9NSD5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 AC096631.2-201ENST00000436136 790 ntBASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 AC121338.2-201ENST00000622535 1744 ntBASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A13Q9NSD5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 AC027702.1-201ENST00000563810 1770 ntBASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A13Q9NSD5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 PBX2P1-201ENST00000493219 1291 ntBASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 AP001330.3-201ENST00000520123 633 ntBASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 BX005040.4-201ENST00000637145 1518 ntBASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A13Q9NSD5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 AC027682.1-201ENST00000562846 899 ntBASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A13Q9NSD5 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 AC106739.1-201ENST00000617035 715 ntBASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A13Q9NSD5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A13Q9NSD5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A13Q9NSD5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms