Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ARGLU1-201ENST00000360629 361 ntTSL 24.16□□□□□ -1.743e-10■■■□□ 16.7
SRSF1Q07955 SNHG6-205ENST00000521399 302 ntTSL 220.02■□□□□ 0.84e-8■■■□□ 16.7
SRSF1Q07955 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.58■□□□□ 0.724e-8■■■□□ 16.7
SRSF1Q07955 SNHG6-204ENST00000521127 560 ntTSL 218.76■□□□□ 0.594e-8■■■□□ 16.7
SRSF1Q07955 SPC24-207ENST00000592967 833 ntTSL 315.01□□□□□ -0.011e-7■■■□□ 16.7
SRSF1Q07955 SPC24-203ENST00000585567 633 ntTSL 314.68□□□□□ -0.061e-7■■■□□ 16.7
SRSF1Q07955 SPC24-201ENST00000423327 840 ntTSL 214.68□□□□□ -0.061e-7■■■□□ 16.7
SRSF1Q07955 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-7■■■□□ 16.7
SRSF1Q07955 SPC24-205ENST00000591396 832 ntTSL 513.53□□□□□ -0.241e-7■■■□□ 16.7
SRSF1Q07955 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.29□□□□□ -0.284e-8■■■□□ 16.7
SRSF1Q07955 SPC24-204ENST00000586708 378 ntTSL 512.66□□□□□ -0.381e-7■■■□□ 16.7
SRSF1Q07955 SPC24-202ENST00000585486 699 ntTSL 211.57□□□□□ -0.561e-7■■■□□ 16.7
SRSF1Q07955 DROSHA-204ENST00000504361 583 ntTSL 311.44□□□□□ -0.586e-10■■■□□ 16.7
SRSF1Q07955 DROSHA-207ENST00000507438 860 ntTSL 48.47□□□□□ -1.056e-10■■■□□ 16.7
SRSF1Q07955 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.41□□□□□ -1.74e-8■■■□□ 16.7
SRSF1Q07955 ARFGAP1-211ENST00000519531 1490 ntTSL 316.18■□□□□ 0.181e-6■■■□□ 16.7
SRSF1Q07955 ARFGAP1-215ENST00000522403 995 ntTSL 514.82□□□□□ -0.041e-6■■■□□ 16.7
SRSF1Q07955 FASN-205ENST00000584610 857 ntTSL 217.6■□□□□ 0.412e-8■■■□□ 16.7
SRSF1Q07955 FASN-202ENST00000578424 951 ntTSL 217.27■□□□□ 0.362e-8■■■□□ 16.7
SRSF1Q07955 FASN-204ENST00000580382 681 ntTSL 316.25■□□□□ 0.192e-8■■■□□ 16.7
SRSF1Q07955 MAN2C1-229ENST00000566013 775 ntTSL 315.53■□□□□ 0.081e-6■■■□□ 16.7
SRSF1Q07955 AAMP-205ENST00000447885 671 ntTSL 513.51□□□□□ -0.254e-7■■■□□ 16.7
SRSF1Q07955 AAMP-208ENST00000475678 2270 ntTSL 213.01□□□□□ -0.334e-7■■■□□ 16.7
SRSF1Q07955 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.374e-7■■■□□ 16.7
SRSF1Q07955 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.55□□□□□ -0.44e-7■■■□□ 16.7
SRSF1Q07955 AAMP-209ENST00000489767 1833 ntTSL 512.19□□□□□ -0.464e-7■■■□□ 16.7
SRSF1Q07955 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.54e-7■■■□□ 16.7
SRSF1Q07955 AAMP-206ENST00000461911 567 ntTSL 211.61□□□□□ -0.554e-7■■■□□ 16.7
SRSF1Q07955 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)11.33□□□□□ -0.61e-9■■■□□ 16.7
SRSF1Q07955 HBG2-202ENST00000380252 694 ntTSL 3 BASIC9.77□□□□□ -0.851e-9■■■□□ 16.7
SRSF1Q07955 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.861e-9■■■□□ 16.7
SRSF1Q07955 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.081e-9■■■□□ 16.7
SRSF1Q07955 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.91□□□□□ -1.31e-9■■■□□ 16.7
SRSF1Q07955 AC087380.1-201ENST00000420465 1001 ntTSL 36.64□□□□□ -1.351e-9■■■□□ 16.7
SRSF1Q07955 AC087380.1-203ENST00000420726 752 ntTSL 55.02□□□□□ -1.611e-9■■■□□ 16.7
SRSF1Q07955 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.651e-9■■■□□ 16.7
SRSF1Q07955 HBE1-203ENST00000396895 578 ntTSL 54.75□□□□□ -1.651e-9■■■□□ 16.7
SRSF1Q07955 DGAT1-205ENST00000527885 605 ntTSL 313.99□□□□□ -0.178e-9■■■□□ 16.7
SRSF1Q07955 DGAT1-203ENST00000524965 1336 ntTSL 513.13□□□□□ -0.318e-9■■■□□ 16.7
SRSF1Q07955 DGAT1-202ENST00000524844 401 ntTSL 36.51□□□□□ -1.378e-9■■■□□ 16.7
SRSF1Q07955 WDR27-210ENST00000496752 1562 ntTSL 515.52■□□□□ 0.072e-6■■■□□ 16.7
SRSF1Q07955 SUGP2-209ENST00000597280 814 ntTSL 313.6□□□□□ -0.236e-10■■■□□ 16.7
SRSF1Q07955 LZTR1-216ENST00000495142 720 ntTSL 315.02■□□□□ -07e-12■■■□□ 16.7
SRSF1Q07955 LZTR1-205ENST00000439171 635 ntTSL 513.84□□□□□ -0.197e-12■■■□□ 16.7
SRSF1Q07955 LZTR1-213ENST00000491432 527 ntTSL 313.62□□□□□ -0.237e-12■■■□□ 16.7
SRSF1Q07955 RBM25-211ENST00000532483 1052 ntTSL 54.78□□□□□ -1.641e-7■■■□□ 16.7
SRSF1Q07955 RBM25-206ENST00000527449 3469 ntTSL 1 (best)2.48□□□□□ -2.011e-7■■■□□ 16.7
SRSF1Q07955 PRH1-205ENST00000541977 507 ntTSL 213.13□□□□□ -0.313e-6■■■□□ 16.7
SRSF1Q07955 TAS2R14-201ENST00000381852 1662 ntTSL 210.68□□□□□ -0.73e-6■■■□□ 16.7
SRSF1Q07955 PRR4-213ENST00000546265 534 ntTSL 510.61□□□□□ -0.713e-6■■■□□ 16.7
SRSF1Q07955 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.713e-6■■■□□ 16.7
SRSF1Q07955 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.073e-6■■■□□ 16.7
SRSF1Q07955 PRR4-208ENST00000541175 384 ntTSL 27.39□□□□□ -1.233e-6■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-224ENST00000581718 574 ntTSL 217.72■□□□□ 0.433e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-203ENST00000472367 794 ntTSL 316.74■□□□□ 0.273e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-212ENST00000483588 688 ntTSL 315.79■□□□□ 0.123e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-229ENST00000584177 574 ntTSL 415.57■□□□□ 0.083e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-227ENST00000583400 712 ntTSL 410.68□□□□□ -0.73e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-207ENST00000478103 712 ntTSL 310.01□□□□□ -0.813e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-222ENST00000580770 572 ntTSL 49.95□□□□□ -0.823e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.36□□□□□ -0.913e-7■■■□□ 16.7
SRSF1Q07955 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.96□□□□□ -1.143e-7■■■□□ 16.7
SRSF1Q07955 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.582e-6■■■□□ 16.7
SRSF1Q07955 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.62e-6■■■□□ 16.7
SRSF1Q07955 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.632e-6■■■□□ 16.7
SRSF1Q07955 TJP2-211ENST00000636247 3725 ntTSL 1 (best)10.18□□□□□ -0.781e-13■■■□□ 16.7
SRSF1Q07955 PPFIA4-211ENST00000600426 2967 ntAPPRIS ALT2 TSL 29.59□□□□□ -0.872e-6■■■□□ 16.7
SRSF1Q07955 LAMB1-205ENST00000439976 703 ntTSL 516.39■□□□□ 0.219e-7■■■□□ 16.6
SRSF1Q07955 LAMB1-202ENST00000393559 550 ntTSL 212.96□□□□□ -0.339e-7■■■□□ 16.6
SRSF1Q07955 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.619e-7■■■□□ 16.6
SRSF1Q07955 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC9.8□□□□□ -0.849e-7■■■□□ 16.6
SRSF1Q07955 CHD2-221ENST00000635856 4236 ntTSL 55.23□□□□□ -1.573e-7■■■□□ 16.6
SRSF1Q07955 CHD2-227ENST00000637572 4452 ntTSL 54.49□□□□□ -1.693e-7■■■□□ 16.6
SRSF1Q07955 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.36□□□□□ -0.271e-6■■■□□ 16.6
SRSF1Q07955 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.31□□□□□ -0.61e-6■■■□□ 16.6
SRSF1Q07955 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.991e-6■■■□□ 16.6
SRSF1Q07955 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.011e-6■■■□□ 16.6
SRSF1Q07955 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.37□□□□□ -1.398e-7■■■□□ 16.6
SRSF1Q07955 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6□□□□□ -1.458e-7■■■□□ 16.6
SRSF1Q07955 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.558e-7■■■□□ 16.6
SRSF1Q07955 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.23□□□□□ -1.578e-7■■■□□ 16.6
SRSF1Q07955 CALD1-223ENST00000496024 557 ntTSL 48.99□□□□□ -0.971e-7■■■□□ 16.6
SRSF1Q07955 CALD1-211ENST00000445569 525 ntTSL 58.66□□□□□ -1.021e-7■■■□□ 16.6
SRSF1Q07955 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.35□□□□□ -0.273e-7■■■□□ 16.6
SRSF1Q07955 TTLL3-215ENST00000438141 1743 ntTSL 210.42□□□□□ -0.743e-7■■■□□ 16.6
SRSF1Q07955 TTLL3-225ENST00000473661 3811 ntTSL 58.76□□□□□ -1.013e-7■■■□□ 16.6
SRSF1Q07955 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC8.55□□□□□ -1.043e-7■■■□□ 16.6
SRSF1Q07955 TTLL3-221ENST00000455274 2848 ntTSL 2 BASIC8.16□□□□□ -1.13e-7■■■□□ 16.6
SRSF1Q07955 CLCN2-213ENST00000636492 1395 ntTSL 516.8■□□□□ 0.282e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-208ENST00000485667 1652 ntTSL 215□□□□□ -0.012e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-211ENST00000636241 2010 ntTSL 513.29□□□□□ -0.282e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.292e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.32e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-215ENST00000636661 4378 ntTSL 513.08□□□□□ -0.322e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-210ENST00000636180 3019 ntTSL 513.03□□□□□ -0.322e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-222ENST00000638134 2118 ntTSL 512.56□□□□□ -0.42e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.482e-6■■■□□ 16.6
SRSF1Q07955 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.522e-6■■■□□ 16.6
SRSF1Q07955 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.058e-10■■■□□ 16.6
SRSF1Q07955 CLCN2-219ENST00000637392 4615 ntTSL 58.37□□□□□ -1.072e-6■■■□□ 16.6
Retrieved 100 of 14,836 protein–RNA pairs in 102 ms