RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
CLCN2-215ENST00000636661 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
CLCN2-215ENST00000636661 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
CLCN2-215ENST00000636661 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
CLCN2-215ENST00000636661 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
CLCN2-215ENST00000636661 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
CLCN2-215ENST00000636661 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
CLCN2-215ENST00000636661 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
CLCN2-215ENST00000636661 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
CLCN2-215ENST00000636661 PPARGC1BQ86YN6 1023 aaKnown RBP25.37■■□□□ 1.65
CLCN2-215ENST00000636661 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
CLCN2-215ENST00000636661 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
CLCN2-215ENST00000636661 APLP2Q06481 763 aa25.35■■□□□ 1.65
CLCN2-215ENST00000636661 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
CLCN2-215ENST00000636661 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
CLCN2-215ENST00000636661 HRCP23327 699 aa25.2■■□□□ 1.62
CLCN2-215ENST00000636661 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
CLCN2-215ENST00000636661 UBTFP17480 764 aaKnown RBP25.05■■□□□ 1.6
CLCN2-215ENST00000636661 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
CLCN2-215ENST00000636661 CENPBP07199 599 aaPredicted RBP24.84■■□□□ 1.57
CLCN2-215ENST00000636661 YTHDC1Q96MU7 727 aaKnown RBP24.79■■□□□ 1.56
CLCN2-215ENST00000636661 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
CLCN2-215ENST00000636661 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
CLCN2-215ENST00000636661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
CLCN2-215ENST00000636661 HNRNPUL2Q1KMD3 747 aaKnown RBP24.44■■□□□ 1.5
CLCN2-215ENST00000636661 ITGAEP38570 1179 aa24.36■■□□□ 1.49
CLCN2-215ENST00000636661 ABCC9O60706 1549 aa24.15■■□□□ 1.46
CLCN2-215ENST00000636661 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
CLCN2-215ENST00000636661 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
CLCN2-215ENST00000636661 NEFLP07196 543 aa23.97■■□□□ 1.43
CLCN2-215ENST00000636661 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
CLCN2-215ENST00000636661 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
CLCN2-215ENST00000636661 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
CLCN2-215ENST00000636661 CNGB1Q14028 1251 aaPredicted RBP23.79■■□□□ 1.4
CLCN2-215ENST00000636661 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
CLCN2-215ENST00000636661 POLR3GLQ9BT43 218 aa23.7■■□□□ 1.38
CLCN2-215ENST00000636661 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
CLCN2-215ENST00000636661 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
CLCN2-215ENST00000636661 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
CLCN2-215ENST00000636661 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
CLCN2-215ENST00000636661 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
CLCN2-215ENST00000636661 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
CLCN2-215ENST00000636661 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
CLCN2-215ENST00000636661 BCANQ96GW7 911 aa23.47■■□□□ 1.35
CLCN2-215ENST00000636661 MYT1Q01538 1121 aa23.46■■□□□ 1.35
CLCN2-215ENST00000636661 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
CLCN2-215ENST00000636661 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
CLCN2-215ENST00000636661 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
CLCN2-215ENST00000636661 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
CLCN2-215ENST00000636661 MYT1LQ9UL68 1186 aa23.18■■□□□ 1.3
CLCN2-215ENST00000636661 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
CLCN2-215ENST00000636661 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
CLCN2-215ENST00000636661 ANP32CO43423 234 aa23.1■■□□□ 1.29
CLCN2-215ENST00000636661 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
CLCN2-215ENST00000636661 MIER1Q8N108 512 aa23.03■■□□□ 1.28
CLCN2-215ENST00000636661 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
CLCN2-215ENST00000636661 FBLN2P98095 1184 aa22.92■■□□□ 1.26
CLCN2-215ENST00000636661 DAXXQ9UER7 740 aaPredicted RBP22.89■■□□□ 1.26
CLCN2-215ENST00000636661 HIRIP3Q9BW71 556 aaPredicted RBP22.88■■□□□ 1.25
CLCN2-215ENST00000636661 CEP162Q5TB80 1403 aa22.86■■□□□ 1.25
CLCN2-215ENST00000636661 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
CLCN2-215ENST00000636661 FKBP8Q14318 412 aa22.84■■□□□ 1.25
CLCN2-215ENST00000636661 CLIP1P30622 1438 aa22.83■■□□□ 1.25
CLCN2-215ENST00000636661 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
CLCN2-215ENST00000636661 CDK11AQ9UQ88 783 aaPredicted RBP22.76■■□□□ 1.23
CLCN2-215ENST00000636661 ZNF777Q9ULD5 760 aaPredicted RBP22.75■■□□□ 1.23
CLCN2-215ENST00000636661 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
CLCN2-215ENST00000636661 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
CLCN2-215ENST00000636661 HNRNPUQ00839 825 aaKnown RBP eCLIP22.69■■□□□ 1.22
CLCN2-215ENST00000636661 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
CLCN2-215ENST00000636661 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
CLCN2-215ENST00000636661 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
CLCN2-215ENST00000636661 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
CLCN2-215ENST00000636661 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
CLCN2-215ENST00000636661 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
CLCN2-215ENST00000636661 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
CLCN2-215ENST00000636661 SOGA1O94964 1423 aa22.59■■□□□ 1.21
CLCN2-215ENST00000636661 IRX6P78412 446 aaPredicted RBP22.55■■□□□ 1.2
CLCN2-215ENST00000636661 EEA1Q15075 1411 aa22.51■■□□□ 1.19
CLCN2-215ENST00000636661 SALL2Q9Y467 1007 aaPredicted RBP22.51■■□□□ 1.19
CLCN2-215ENST00000636661 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
CLCN2-215ENST00000636661 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
CLCN2-215ENST00000636661 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
CLCN2-215ENST00000636661 MTUS2Q5JR59 1369 aa22.44■■□□□ 1.18
CLCN2-215ENST00000636661 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
CLCN2-215ENST00000636661 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
CLCN2-215ENST00000636661 NACADO15069 1562 aa22.41■■□□□ 1.18
CLCN2-215ENST00000636661 ABCC8Q09428 1581 aa22.39■■□□□ 1.17
CLCN2-215ENST00000636661 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
CLCN2-215ENST00000636661 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
CLCN2-215ENST00000636661 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
CLCN2-215ENST00000636661 BCL11AQ9H165 835 aa22.34■■□□□ 1.17
CLCN2-215ENST00000636661 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.17
CLCN2-215ENST00000636661 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
CLCN2-215ENST00000636661 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
CLCN2-215ENST00000636661 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
CLCN2-215ENST00000636661 ANP32AP39687 249 aaKnown RBP22.28■■□□□ 1.16
CLCN2-215ENST00000636661 TMC1Q8TDI8 760 aa22.27■■□□□ 1.15
CLCN2-215ENST00000636661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLCN2-215ENST00000636661 EIF4G2P78344 907 aaKnown RBP eCLIP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms