RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, humanhuman

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-205ENST00000439976 NISCHQ9Y2I1 1504 aa41.35■■■■■ 4.21
LAMB1-205ENST00000439976 ABCC9O60706 1549 aa37.46■■■■□ 3.59
LAMB1-205ENST00000439976 CCDC180Q9P1Z9 1646 aa37.2■■■■□ 3.55
LAMB1-205ENST00000439976 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.27
LAMB1-205ENST00000439976 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
LAMB1-205ENST00000439976 NACADO15069 1562 aa35.23■■■■□ 3.23
LAMB1-205ENST00000439976 DCAF8L2P0C7V8 631 aa34.89■■■■□ 3.18
LAMB1-205ENST00000439976 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
LAMB1-205ENST00000439976 UNC13AQ9UPW8 1703 aa34.78■■■■□ 3.16
LAMB1-205ENST00000439976 MYO15BQ96JP2 1530 aa34.7■■■■□ 3.14
LAMB1-205ENST00000439976 BICRAQ9NZM4 1560 aa34.58■■■■□ 3.13
LAMB1-205ENST00000439976 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
LAMB1-205ENST00000439976 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
LAMB1-205ENST00000439976 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
LAMB1-205ENST00000439976 SCRIBQ14160 1630 aa33.87■■■■□ 3.01
LAMB1-205ENST00000439976 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
LAMB1-205ENST00000439976 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
LAMB1-205ENST00000439976 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
LAMB1-205ENST00000439976 DNAJC5Q9H3Z4 198 aa32.69■■■□□ 2.82
LAMB1-205ENST00000439976 NCAPD3P42695 1498 aa32.56■■■□□ 2.8
LAMB1-205ENST00000439976 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
LAMB1-205ENST00000439976 CUX2O14529 1486 aa32.38■■■□□ 2.77
LAMB1-205ENST00000439976 SMARCA4P51532 1647 aa32.31■■■□□ 2.76
LAMB1-205ENST00000439976 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
LAMB1-205ENST00000439976 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
LAMB1-205ENST00000439976 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
LAMB1-205ENST00000439976 NESP48681 1621 aa32.14■■■□□ 2.74
LAMB1-205ENST00000439976 BAZ1AQ9NRL2 1556 aaPredicted RBP32.08■■■□□ 2.73
LAMB1-205ENST00000439976 BAZ1BQ9UIG0 1483 aaKnown RBP32.04■■■□□ 2.72
LAMB1-205ENST00000439976 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
LAMB1-205ENST00000439976 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
LAMB1-205ENST00000439976 THOC2Q8NI27 1593 aaKnown RBP31.87■■■□□ 2.69
LAMB1-205ENST00000439976 LAMC3Q9Y6N6 1575 aa31.82■■■□□ 2.68
LAMB1-205ENST00000439976 KIF21AQ7Z4S6 1674 aa31.69■■■□□ 2.66
LAMB1-205ENST00000439976 PDS5BQ9NTI5 1447 aa31.63■■■□□ 2.65
LAMB1-205ENST00000439976 CADPSQ9ULU8 1353 aa31.53■■■□□ 2.64
LAMB1-205ENST00000439976 WIZO95785 1651 aa31.46■■■□□ 2.63
LAMB1-205ENST00000439976 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
LAMB1-205ENST00000439976 WDR62O43379 1518 aa31.36■■■□□ 2.61
LAMB1-205ENST00000439976 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
LAMB1-205ENST00000439976 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
LAMB1-205ENST00000439976 CFTRP13569 1480 aa31.14■■■□□ 2.58
LAMB1-205ENST00000439976 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
LAMB1-205ENST00000439976 TRIM41Q8WV44 630 aa31.06■■■□□ 2.56
LAMB1-205ENST00000439976 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
LAMB1-205ENST00000439976 URB2Q14146 1524 aaKnown RBP30.97■■■□□ 2.55
LAMB1-205ENST00000439976 OSCARQ8IYS5 282 aa30.83■■■□□ 2.53
LAMB1-205ENST00000439976 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
LAMB1-205ENST00000439976 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
LAMB1-205ENST00000439976 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
LAMB1-205ENST00000439976 IFT140Q96RY7 1462 aa30.6■■■□□ 2.49
LAMB1-205ENST00000439976 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
LAMB1-205ENST00000439976 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.47
LAMB1-205ENST00000439976 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.47
LAMB1-205ENST00000439976 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.47
LAMB1-205ENST00000439976 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
LAMB1-205ENST00000439976 EIF4G3O43432 1585 aaKnown RBP30.41■■■□□ 2.46
LAMB1-205ENST00000439976 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
LAMB1-205ENST00000439976 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
LAMB1-205ENST00000439976 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
LAMB1-205ENST00000439976 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.441e-10■■■■■ 44
LAMB1-205ENST00000439976 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
LAMB1-205ENST00000439976 CHD1O14646 1710 aa30.24■■■□□ 2.43
LAMB1-205ENST00000439976 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
LAMB1-205ENST00000439976 CYB5RLQ6IPT4 315 aa30.13■■■□□ 2.41
LAMB1-205ENST00000439976 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
LAMB1-205ENST00000439976 FBLN2P98095 1184 aa30.06■■■□□ 2.4
LAMB1-205ENST00000439976 SOGA1O94964 1423 aa30.05■■■□□ 2.4
LAMB1-205ENST00000439976 TDRD9Q8NDG6 1382 aaKnown RBP30.05■■■□□ 2.4
LAMB1-205ENST00000439976 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
LAMB1-205ENST00000439976 SNAPC4Q5SXM2 1469 aa29.97■■■□□ 2.39
LAMB1-205ENST00000439976 CUX1P39880 1505 aa29.96■■■□□ 2.39
LAMB1-205ENST00000439976 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
LAMB1-205ENST00000439976 CLASP1Q7Z460 1538 aa29.92■■■□□ 2.38
LAMB1-205ENST00000439976 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
LAMB1-205ENST00000439976 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
LAMB1-205ENST00000439976 TRHP20396 242 aaPredicted RBP29.82■■■□□ 2.36
LAMB1-205ENST00000439976 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
LAMB1-205ENST00000439976 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
LAMB1-205ENST00000439976 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
LAMB1-205ENST00000439976 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
LAMB1-205ENST00000439976 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
LAMB1-205ENST00000439976 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
LAMB1-205ENST00000439976 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
LAMB1-205ENST00000439976 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
LAMB1-205ENST00000439976 ERCC6L2Q5T890 1561 aa29.45■■■□□ 2.31
LAMB1-205ENST00000439976 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
LAMB1-205ENST00000439976 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
LAMB1-205ENST00000439976 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
LAMB1-205ENST00000439976 NUP160Q12769 1436 aa29.41■■■□□ 2.3
LAMB1-205ENST00000439976 CEP170Q5SW79 1584 aa29.4■■■□□ 2.3
LAMB1-205ENST00000439976 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
LAMB1-205ENST00000439976 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
LAMB1-205ENST00000439976 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
LAMB1-205ENST00000439976 FHAD1B1AJZ9 1412 aa29.31■■■□□ 2.28
LAMB1-205ENST00000439976 ERICH3Q5RHP9 1530 aa29.26■■■□□ 2.27
LAMB1-205ENST00000439976 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
LAMB1-205ENST00000439976 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
LAMB1-205ENST00000439976 JPH4Q96JJ6 628 aa29.06■■■□□ 2.24
LAMB1-205ENST00000439976 KIF13AQ9H1H9 1805 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms