RNA–Protein interactions for RNA: ENST00000591396.5

SPC24-205, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-205ENST00000591396 NISCHQ9Y2I1 1504 aa35.75■■■■□ 3.31
SPC24-205ENST00000591396 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
SPC24-205ENST00000591396 ABCC9O60706 1549 aa31.02■■■□□ 2.56
SPC24-205ENST00000591396 NACADO15069 1562 aa29.9■■■□□ 2.38
SPC24-205ENST00000591396 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
SPC24-205ENST00000591396 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
SPC24-205ENST00000591396 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
SPC24-205ENST00000591396 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
SPC24-205ENST00000591396 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
SPC24-205ENST00000591396 UNC13AQ9UPW8 1703 aa29.03■■■□□ 2.24
SPC24-205ENST00000591396 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
SPC24-205ENST00000591396 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.22
SPC24-205ENST00000591396 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
SPC24-205ENST00000591396 SHROOM4Q9ULL8 1493 aa28.79■■■□□ 2.2
SPC24-205ENST00000591396 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
SPC24-205ENST00000591396 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
SPC24-205ENST00000591396 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
SPC24-205ENST00000591396 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
SPC24-205ENST00000591396 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SPC24-205ENST00000591396 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
SPC24-205ENST00000591396 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
SPC24-205ENST00000591396 ATAD2BQ9ULI0 1458 aa27.6■■■□□ 2.01
SPC24-205ENST00000591396 SMARCA2P51531 1590 aa27.56■■■□□ 2
SPC24-205ENST00000591396 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
SPC24-205ENST00000591396 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
SPC24-205ENST00000591396 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
SPC24-205ENST00000591396 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
SPC24-205ENST00000591396 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
SPC24-205ENST00000591396 WIZO95785 1651 aa27.14■■□□□ 1.93
SPC24-205ENST00000591396 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
SPC24-205ENST00000591396 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
SPC24-205ENST00000591396 NESP48681 1621 aa26.83■■□□□ 1.88
SPC24-205ENST00000591396 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
SPC24-205ENST00000591396 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
SPC24-205ENST00000591396 PDS5BQ9NTI5 1447 aa26.72■■□□□ 1.87
SPC24-205ENST00000591396 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
SPC24-205ENST00000591396 CFTRP13569 1480 aa26.64■■□□□ 1.86
SPC24-205ENST00000591396 CUX2O14529 1486 aa26.55■■□□□ 1.84
SPC24-205ENST00000591396 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
SPC24-205ENST00000591396 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
SPC24-205ENST00000591396 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
SPC24-205ENST00000591396 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
SPC24-205ENST00000591396 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
SPC24-205ENST00000591396 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
SPC24-205ENST00000591396 WDR62O43379 1518 aa26.29■■□□□ 1.8
SPC24-205ENST00000591396 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
SPC24-205ENST00000591396 URB2Q14146 1524 aaKnown RBP26.16■■□□□ 1.78
SPC24-205ENST00000591396 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
SPC24-205ENST00000591396 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
SPC24-205ENST00000591396 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
SPC24-205ENST00000591396 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
SPC24-205ENST00000591396 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
SPC24-205ENST00000591396 CUX1P39880 1505 aa25.79■■□□□ 1.72
SPC24-205ENST00000591396 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
SPC24-205ENST00000591396 SOGA1O94964 1423 aa25.73■■□□□ 1.71
SPC24-205ENST00000591396 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
SPC24-205ENST00000591396 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
SPC24-205ENST00000591396 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
SPC24-205ENST00000591396 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
SPC24-205ENST00000591396 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
SPC24-205ENST00000591396 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
SPC24-205ENST00000591396 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.694e-7■□□□□ 8.6
SPC24-205ENST00000591396 WDR97A6NE52 1622 aa25.58■■□□□ 1.69
SPC24-205ENST00000591396 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
SPC24-205ENST00000591396 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
SPC24-205ENST00000591396 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
SPC24-205ENST00000591396 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
SPC24-205ENST00000591396 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
SPC24-205ENST00000591396 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
SPC24-205ENST00000591396 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
SPC24-205ENST00000591396 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
SPC24-205ENST00000591396 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
SPC24-205ENST00000591396 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
SPC24-205ENST00000591396 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
SPC24-205ENST00000591396 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SPC24-205ENST00000591396 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SPC24-205ENST00000591396 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
SPC24-205ENST00000591396 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
SPC24-205ENST00000591396 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
SPC24-205ENST00000591396 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
SPC24-205ENST00000591396 CHD1O14646 1710 aa25.17■■□□□ 1.62
SPC24-205ENST00000591396 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
SPC24-205ENST00000591396 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
SPC24-205ENST00000591396 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
SPC24-205ENST00000591396 IGF1RP08069 1367 aa25.09■■□□□ 1.61
SPC24-205ENST00000591396 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
SPC24-205ENST00000591396 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
SPC24-205ENST00000591396 NUP160Q12769 1436 aa25■■□□□ 1.59
SPC24-205ENST00000591396 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
SPC24-205ENST00000591396 CUL7Q14999 1698 aa24.93■■□□□ 1.58
SPC24-205ENST00000591396 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
SPC24-205ENST00000591396 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
SPC24-205ENST00000591396 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
SPC24-205ENST00000591396 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
SPC24-205ENST00000591396 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
SPC24-205ENST00000591396 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
SPC24-205ENST00000591396 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
SPC24-205ENST00000591396 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
SPC24-205ENST00000591396 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
SPC24-205ENST00000591396 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms