RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 NISCHQ9Y2I1 1504 aa31.51■■■□□ 2.63
SPC24-202ENST00000585486 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
SPC24-202ENST00000585486 ABCC9O60706 1549 aa26.41■■□□□ 1.82
SPC24-202ENST00000585486 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
SPC24-202ENST00000585486 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
SPC24-202ENST00000585486 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
SPC24-202ENST00000585486 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
SPC24-202ENST00000585486 NACADO15069 1562 aa25.83■■□□□ 1.73
SPC24-202ENST00000585486 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
SPC24-202ENST00000585486 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
SPC24-202ENST00000585486 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
SPC24-202ENST00000585486 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
SPC24-202ENST00000585486 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
SPC24-202ENST00000585486 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPC24-202ENST00000585486 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
SPC24-202ENST00000585486 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
SPC24-202ENST00000585486 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
SPC24-202ENST00000585486 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
SPC24-202ENST00000585486 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
SPC24-202ENST00000585486 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
SPC24-202ENST00000585486 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
SPC24-202ENST00000585486 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.44
SPC24-202ENST00000585486 WIZO95785 1651 aa24.05■■□□□ 1.44
SPC24-202ENST00000585486 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
SPC24-202ENST00000585486 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
SPC24-202ENST00000585486 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
SPC24-202ENST00000585486 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
SPC24-202ENST00000585486 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
SPC24-202ENST00000585486 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
SPC24-202ENST00000585486 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
SPC24-202ENST00000585486 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
SPC24-202ENST00000585486 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
SPC24-202ENST00000585486 CFTRP13569 1480 aa23.24■■□□□ 1.31
SPC24-202ENST00000585486 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
SPC24-202ENST00000585486 NESP48681 1621 aa23.11■■□□□ 1.29
SPC24-202ENST00000585486 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
SPC24-202ENST00000585486 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
SPC24-202ENST00000585486 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
SPC24-202ENST00000585486 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
SPC24-202ENST00000585486 ABCC8Q09428 1581 aa22.89■■□□□ 1.26
SPC24-202ENST00000585486 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
SPC24-202ENST00000585486 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
SPC24-202ENST00000585486 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
SPC24-202ENST00000585486 CEP164Q9UPV0 1460 aa22.78■■□□□ 1.24
SPC24-202ENST00000585486 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
SPC24-202ENST00000585486 CUX1P39880 1505 aa22.76■■□□□ 1.23
SPC24-202ENST00000585486 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
SPC24-202ENST00000585486 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
SPC24-202ENST00000585486 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
SPC24-202ENST00000585486 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
SPC24-202ENST00000585486 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
SPC24-202ENST00000585486 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
SPC24-202ENST00000585486 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.21
SPC24-202ENST00000585486 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
SPC24-202ENST00000585486 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
SPC24-202ENST00000585486 WDR62O43379 1518 aa22.57■■□□□ 1.2
SPC24-202ENST00000585486 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
SPC24-202ENST00000585486 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
SPC24-202ENST00000585486 CUX2O14529 1486 aa22.45■■□□□ 1.18
SPC24-202ENST00000585486 SOGA1O94964 1423 aa22.42■■□□□ 1.18
SPC24-202ENST00000585486 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
SPC24-202ENST00000585486 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
SPC24-202ENST00000585486 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
SPC24-202ENST00000585486 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
SPC24-202ENST00000585486 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
SPC24-202ENST00000585486 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
SPC24-202ENST00000585486 EEA1Q15075 1411 aa22.28■■□□□ 1.16
SPC24-202ENST00000585486 KIF27Q86VH2 1401 aa22.25■■□□□ 1.15
SPC24-202ENST00000585486 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
SPC24-202ENST00000585486 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
SPC24-202ENST00000585486 ABCA5Q8WWZ7 1642 aa22.21■■□□□ 1.15
SPC24-202ENST00000585486 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
SPC24-202ENST00000585486 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
SPC24-202ENST00000585486 IGF1RP08069 1367 aa22.19■■□□□ 1.14
SPC24-202ENST00000585486 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.144e-7■□□□□ 8.6
SPC24-202ENST00000585486 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
SPC24-202ENST00000585486 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
SPC24-202ENST00000585486 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
SPC24-202ENST00000585486 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
SPC24-202ENST00000585486 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
SPC24-202ENST00000585486 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
SPC24-202ENST00000585486 KIF21BO75037 1637 aa22.02■■□□□ 1.12
SPC24-202ENST00000585486 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
SPC24-202ENST00000585486 PBRM1Q86U86 1689 aa22■■□□□ 1.11
SPC24-202ENST00000585486 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
SPC24-202ENST00000585486 CUL7Q14999 1698 aa21.95■■□□□ 1.1
SPC24-202ENST00000585486 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
SPC24-202ENST00000585486 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
SPC24-202ENST00000585486 SNAPC4Q5SXM2 1469 aa21.92■■□□□ 1.1
SPC24-202ENST00000585486 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
SPC24-202ENST00000585486 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
SPC24-202ENST00000585486 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
SPC24-202ENST00000585486 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.08
SPC24-202ENST00000585486 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
SPC24-202ENST00000585486 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
SPC24-202ENST00000585486 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
SPC24-202ENST00000585486 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
SPC24-202ENST00000585486 NUP160Q12769 1436 aa21.7■■□□□ 1.06
SPC24-202ENST00000585486 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
SPC24-202ENST00000585486 CHD1O14646 1710 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms