RNA–Protein interactions for RNA: ENST00000485667.1

CLCN2-208, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 1,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-208ENST00000485667 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
CLCN2-208ENST00000485667 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
CLCN2-208ENST00000485667 ABCC9O60706 1549 aa34.52■■■■□ 3.12
CLCN2-208ENST00000485667 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
CLCN2-208ENST00000485667 NACADO15069 1562 aa32.7■■■□□ 2.82
CLCN2-208ENST00000485667 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
CLCN2-208ENST00000485667 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
CLCN2-208ENST00000485667 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
CLCN2-208ENST00000485667 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
CLCN2-208ENST00000485667 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
CLCN2-208ENST00000485667 ZCCHC6Q5VYS8 1495 aaKnown RBP32■■■□□ 2.71
CLCN2-208ENST00000485667 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
CLCN2-208ENST00000485667 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
CLCN2-208ENST00000485667 SCRIBQ14160 1630 aa31.59■■■□□ 2.65
CLCN2-208ENST00000485667 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
CLCN2-208ENST00000485667 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
CLCN2-208ENST00000485667 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
CLCN2-208ENST00000485667 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
CLCN2-208ENST00000485667 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
CLCN2-208ENST00000485667 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
CLCN2-208ENST00000485667 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
CLCN2-208ENST00000485667 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
CLCN2-208ENST00000485667 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
CLCN2-208ENST00000485667 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
CLCN2-208ENST00000485667 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
CLCN2-208ENST00000485667 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
CLCN2-208ENST00000485667 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
CLCN2-208ENST00000485667 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
CLCN2-208ENST00000485667 CUX2O14529 1486 aa29.71■■■□□ 2.35
CLCN2-208ENST00000485667 NESP48681 1621 aa29.65■■■□□ 2.34
CLCN2-208ENST00000485667 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
CLCN2-208ENST00000485667 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
CLCN2-208ENST00000485667 WIZO95785 1651 aa29.41■■■□□ 2.3
CLCN2-208ENST00000485667 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
CLCN2-208ENST00000485667 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
CLCN2-208ENST00000485667 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
CLCN2-208ENST00000485667 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
CLCN2-208ENST00000485667 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
CLCN2-208ENST00000485667 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
CLCN2-208ENST00000485667 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
CLCN2-208ENST00000485667 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
CLCN2-208ENST00000485667 WDR62O43379 1518 aa28.98■■■□□ 2.23
CLCN2-208ENST00000485667 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
CLCN2-208ENST00000485667 CFTRP13569 1480 aa28.92■■■□□ 2.22
CLCN2-208ENST00000485667 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
CLCN2-208ENST00000485667 PRDM2Q13029 1718 aa28.74■■■□□ 2.19
CLCN2-208ENST00000485667 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
CLCN2-208ENST00000485667 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
CLCN2-208ENST00000485667 TOPBP1Q92547 1522 aa28.4■■■□□ 2.14
CLCN2-208ENST00000485667 IFT140Q96RY7 1462 aa28.39■■■□□ 2.13
CLCN2-208ENST00000485667 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
CLCN2-208ENST00000485667 OSCARQ8IYS5 282 aa28.35■■■□□ 2.13
CLCN2-208ENST00000485667 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
CLCN2-208ENST00000485667 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.13
CLCN2-208ENST00000485667 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
CLCN2-208ENST00000485667 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
CLCN2-208ENST00000485667 TARBP1Q13395 1621 aaKnown RBP28.13■■■□□ 2.09
CLCN2-208ENST00000485667 POLA1P09884 1462 aaPredicted RBP28.11■■■□□ 2.09
CLCN2-208ENST00000485667 AQRO60306 1485 aaKnown RBP eCLIP28.06■■■□□ 2.081e-7■■■■■ 29.3
CLCN2-208ENST00000485667 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
CLCN2-208ENST00000485667 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
CLCN2-208ENST00000485667 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
CLCN2-208ENST00000485667 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
CLCN2-208ENST00000485667 SOGA1O94964 1423 aa27.99■■■□□ 2.07
CLCN2-208ENST00000485667 CHD1O14646 1710 aa27.99■■■□□ 2.07
CLCN2-208ENST00000485667 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
CLCN2-208ENST00000485667 CUX1P39880 1505 aa27.94■■■□□ 2.06
CLCN2-208ENST00000485667 FBLN2P98095 1184 aa27.93■■■□□ 2.06
CLCN2-208ENST00000485667 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
CLCN2-208ENST00000485667 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
CLCN2-208ENST00000485667 WDR97A6NE52 1622 aa27.89■■■□□ 2.06
CLCN2-208ENST00000485667 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
CLCN2-208ENST00000485667 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
CLCN2-208ENST00000485667 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
CLCN2-208ENST00000485667 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
CLCN2-208ENST00000485667 PBRM1Q86U86 1689 aa27.7■■■□□ 2.03
CLCN2-208ENST00000485667 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
CLCN2-208ENST00000485667 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
CLCN2-208ENST00000485667 GAPVD1Q14C86 1478 aa27.67■■■□□ 2.02
CLCN2-208ENST00000485667 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
CLCN2-208ENST00000485667 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
CLCN2-208ENST00000485667 ABCA10Q8WWZ4 1543 aa27.64■■■□□ 2.02
CLCN2-208ENST00000485667 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
CLCN2-208ENST00000485667 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
CLCN2-208ENST00000485667 ABCA5Q8WWZ7 1642 aa27.61■■■□□ 2.01
CLCN2-208ENST00000485667 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
CLCN2-208ENST00000485667 TOP2BQ02880 1626 aa27.54■■■□□ 2
CLCN2-208ENST00000485667 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
CLCN2-208ENST00000485667 ADAMTS12P58397 1594 aa27.41■■□□□ 1.98
CLCN2-208ENST00000485667 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
CLCN2-208ENST00000485667 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
CLCN2-208ENST00000485667 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
CLCN2-208ENST00000485667 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
CLCN2-208ENST00000485667 NUP160Q12769 1436 aa27.26■■□□□ 1.95
CLCN2-208ENST00000485667 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
CLCN2-208ENST00000485667 SHROOM2Q13796 1616 aa27.14■■□□□ 1.94
CLCN2-208ENST00000485667 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
CLCN2-208ENST00000485667 PRG4Q92954 1404 aaPredicted RBP27.02■■□□□ 1.92
CLCN2-208ENST00000485667 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
CLCN2-208ENST00000485667 CUL7Q14999 1698 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms