RNA–Protein interactions for RNA: ENST00000586708.1

SPC24-204, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-204ENST00000586708 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
SPC24-204ENST00000586708 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
SPC24-204ENST00000586708 ABCC9O60706 1549 aa29.11■■■□□ 2.25
SPC24-204ENST00000586708 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
SPC24-204ENST00000586708 NACADO15069 1562 aa28.03■■■□□ 2.08
SPC24-204ENST00000586708 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
SPC24-204ENST00000586708 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
SPC24-204ENST00000586708 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
SPC24-204ENST00000586708 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
SPC24-204ENST00000586708 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
SPC24-204ENST00000586708 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
SPC24-204ENST00000586708 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
SPC24-204ENST00000586708 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
SPC24-204ENST00000586708 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
SPC24-204ENST00000586708 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
SPC24-204ENST00000586708 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
SPC24-204ENST00000586708 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
SPC24-204ENST00000586708 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
SPC24-204ENST00000586708 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
SPC24-204ENST00000586708 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
SPC24-204ENST00000586708 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
SPC24-204ENST00000586708 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
SPC24-204ENST00000586708 SMARCA2P51531 1590 aa25.83■■□□□ 1.73
SPC24-204ENST00000586708 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
SPC24-204ENST00000586708 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
SPC24-204ENST00000586708 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
SPC24-204ENST00000586708 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
SPC24-204ENST00000586708 WIZO95785 1651 aa25.52■■□□□ 1.68
SPC24-204ENST00000586708 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
SPC24-204ENST00000586708 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
SPC24-204ENST00000586708 NESP48681 1621 aa25.21■■□□□ 1.63
SPC24-204ENST00000586708 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
SPC24-204ENST00000586708 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
SPC24-204ENST00000586708 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
SPC24-204ENST00000586708 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
SPC24-204ENST00000586708 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
SPC24-204ENST00000586708 CFTRP13569 1480 aa24.96■■□□□ 1.59
SPC24-204ENST00000586708 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
SPC24-204ENST00000586708 CUX2O14529 1486 aa24.89■■□□□ 1.57
SPC24-204ENST00000586708 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
SPC24-204ENST00000586708 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
SPC24-204ENST00000586708 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
SPC24-204ENST00000586708 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
SPC24-204ENST00000586708 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
SPC24-204ENST00000586708 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
SPC24-204ENST00000586708 WDR62O43379 1518 aa24.69■■□□□ 1.54
SPC24-204ENST00000586708 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
SPC24-204ENST00000586708 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
SPC24-204ENST00000586708 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
SPC24-204ENST00000586708 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
SPC24-204ENST00000586708 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
SPC24-204ENST00000586708 CUX1P39880 1505 aa24.23■■□□□ 1.47
SPC24-204ENST00000586708 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
SPC24-204ENST00000586708 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
SPC24-204ENST00000586708 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
SPC24-204ENST00000586708 DNAJC5Q9H3Z4 198 aa24.12■■□□□ 1.45
SPC24-204ENST00000586708 FGD5Q6ZNL6 1462 aa24.12■■□□□ 1.45
SPC24-204ENST00000586708 SOGA1O94964 1423 aa24.07■■□□□ 1.44
SPC24-204ENST00000586708 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
SPC24-204ENST00000586708 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
SPC24-204ENST00000586708 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
SPC24-204ENST00000586708 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
SPC24-204ENST00000586708 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
SPC24-204ENST00000586708 SYNJ1O43426 1573 aa24■■□□□ 1.43
SPC24-204ENST00000586708 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
SPC24-204ENST00000586708 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.434e-7■□□□□ 8.6
SPC24-204ENST00000586708 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
SPC24-204ENST00000586708 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
SPC24-204ENST00000586708 ABCA5Q8WWZ7 1642 aa23.84■■□□□ 1.41
SPC24-204ENST00000586708 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
SPC24-204ENST00000586708 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
SPC24-204ENST00000586708 OSCARQ8IYS5 282 aa23.78■■□□□ 1.4
SPC24-204ENST00000586708 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SPC24-204ENST00000586708 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
SPC24-204ENST00000586708 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
SPC24-204ENST00000586708 CHD1O14646 1710 aa23.74■■□□□ 1.39
SPC24-204ENST00000586708 SYNJ2O15056 1496 aa23.66■■□□□ 1.38
SPC24-204ENST00000586708 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
SPC24-204ENST00000586708 FBLN2P98095 1184 aa23.59■■□□□ 1.37
SPC24-204ENST00000586708 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
SPC24-204ENST00000586708 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
SPC24-204ENST00000586708 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
SPC24-204ENST00000586708 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
SPC24-204ENST00000586708 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
SPC24-204ENST00000586708 GRIN2AQ12879 1464 aa23.51■■□□□ 1.35
SPC24-204ENST00000586708 IGF1RP08069 1367 aa23.47■■□□□ 1.35
SPC24-204ENST00000586708 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
SPC24-204ENST00000586708 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
SPC24-204ENST00000586708 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
SPC24-204ENST00000586708 ARHGEF11O15085 1522 aa23.45■■□□□ 1.34
SPC24-204ENST00000586708 NUP160Q12769 1436 aa23.44■■□□□ 1.34
SPC24-204ENST00000586708 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
SPC24-204ENST00000586708 CUL7Q14999 1698 aa23.4■■□□□ 1.34
SPC24-204ENST00000586708 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
SPC24-204ENST00000586708 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
SPC24-204ENST00000586708 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
SPC24-204ENST00000586708 SHROOM2Q13796 1616 aa23.28■■□□□ 1.32
SPC24-204ENST00000586708 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
SPC24-204ENST00000586708 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
SPC24-204ENST00000586708 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms