RNA–Protein interactions for RNA: ENST00000636180.1

CLCN2-210, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 3,019 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-210ENST00000636180 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
CLCN2-210ENST00000636180 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
CLCN2-210ENST00000636180 SUPT5HO00267 1087 aaKnown RBP30.09■■■□□ 2.41
CLCN2-210ENST00000636180 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
CLCN2-210ENST00000636180 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
CLCN2-210ENST00000636180 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
CLCN2-210ENST00000636180 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.23
CLCN2-210ENST00000636180 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
CLCN2-210ENST00000636180 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
CLCN2-210ENST00000636180 LOC105371045A0A1W2PR82 267 aa28.47■■■□□ 2.15
CLCN2-210ENST00000636180 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
CLCN2-210ENST00000636180 HRCP23327 699 aa28.31■■■□□ 2.12
CLCN2-210ENST00000636180 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
CLCN2-210ENST00000636180 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
CLCN2-210ENST00000636180 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
CLCN2-210ENST00000636180 FAM9AQ8IZU1 332 aaPredicted RBP27.92■■■□□ 2.06
CLCN2-210ENST00000636180 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
CLCN2-210ENST00000636180 ABCC9O60706 1549 aa27.83■■■□□ 2.05
CLCN2-210ENST00000636180 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
CLCN2-210ENST00000636180 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
CLCN2-210ENST00000636180 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
CLCN2-210ENST00000636180 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
CLCN2-210ENST00000636180 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
CLCN2-210ENST00000636180 WIZO95785 1651 aa27.2■■□□□ 1.95
CLCN2-210ENST00000636180 NACADO15069 1562 aa27.19■■□□□ 1.94
CLCN2-210ENST00000636180 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
CLCN2-210ENST00000636180 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
CLCN2-210ENST00000636180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
CLCN2-210ENST00000636180 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
CLCN2-210ENST00000636180 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
CLCN2-210ENST00000636180 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
CLCN2-210ENST00000636180 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
CLCN2-210ENST00000636180 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
CLCN2-210ENST00000636180 SOGA1O94964 1423 aa26.59■■□□□ 1.85
CLCN2-210ENST00000636180 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.84
CLCN2-210ENST00000636180 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
CLCN2-210ENST00000636180 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
CLCN2-210ENST00000636180 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
CLCN2-210ENST00000636180 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
CLCN2-210ENST00000636180 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
CLCN2-210ENST00000636180 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.83
CLCN2-210ENST00000636180 CSRNP3Q8WYN3 585 aa26.41■■□□□ 1.82
CLCN2-210ENST00000636180 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
CLCN2-210ENST00000636180 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
CLCN2-210ENST00000636180 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.8
CLCN2-210ENST00000636180 TNIKQ9UKE5 1360 aa26.23■■□□□ 1.79
CLCN2-210ENST00000636180 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
CLCN2-210ENST00000636180 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
CLCN2-210ENST00000636180 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
CLCN2-210ENST00000636180 DIEXFQ68CQ4 756 aaKnown RBP26.12■■□□□ 1.77
CLCN2-210ENST00000636180 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
CLCN2-210ENST00000636180 NEUROD1Q13562 356 aa26.02■■□□□ 1.76
CLCN2-210ENST00000636180 EEA1Q15075 1411 aa26.01■■□□□ 1.75
CLCN2-210ENST00000636180 SYNJ1O43426 1573 aa26■■□□□ 1.75
CLCN2-210ENST00000636180 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
CLCN2-210ENST00000636180 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
CLCN2-210ENST00000636180 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
CLCN2-210ENST00000636180 CLIP1P30622 1438 aa25.89■■□□□ 1.74
CLCN2-210ENST00000636180 APLP2Q06481 763 aa25.88■■□□□ 1.73
CLCN2-210ENST00000636180 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
CLCN2-210ENST00000636180 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
CLCN2-210ENST00000636180 YTHDC1Q96MU7 727 aaKnown RBP25.84■■□□□ 1.73
CLCN2-210ENST00000636180 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
CLCN2-210ENST00000636180 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
CLCN2-210ENST00000636180 GTF3C3Q9Y5Q9 886 aa25.78■■□□□ 1.72
CLCN2-210ENST00000636180 VPS8Q8N3P4 1428 aa25.69■■□□□ 1.7
CLCN2-210ENST00000636180 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
CLCN2-210ENST00000636180 KIF21BO75037 1637 aa25.67■■□□□ 1.7
CLCN2-210ENST00000636180 MIER1Q8N108 512 aa25.62■■□□□ 1.69
CLCN2-210ENST00000636180 KANK4Q5T7N3 995 aaPredicted RBP25.59■■□□□ 1.69
CLCN2-210ENST00000636180 ITGAEP38570 1179 aa25.53■■□□□ 1.68
CLCN2-210ENST00000636180 TOP2BQ02880 1626 aa25.5■■□□□ 1.67
CLCN2-210ENST00000636180 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.66
CLCN2-210ENST00000636180 CUX1P39880 1505 aa25.38■■□□□ 1.65
CLCN2-210ENST00000636180 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
CLCN2-210ENST00000636180 PRXQ9BXM0 1461 aa25.36■■□□□ 1.65
CLCN2-210ENST00000636180 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
CLCN2-210ENST00000636180 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
CLCN2-210ENST00000636180 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CLCN2-210ENST00000636180 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
CLCN2-210ENST00000636180 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
CLCN2-210ENST00000636180 ATP1B4Q9UN42 357 aaPredicted RBP25.25■■□□□ 1.63
CLCN2-210ENST00000636180 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
CLCN2-210ENST00000636180 CFTRP13569 1480 aa25.17■■□□□ 1.62
CLCN2-210ENST00000636180 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
CLCN2-210ENST00000636180 CUX2O14529 1486 aa25.15■■□□□ 1.62
CLCN2-210ENST00000636180 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
CLCN2-210ENST00000636180 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
CLCN2-210ENST00000636180 IGF1RP08069 1367 aa25.1■■□□□ 1.61
CLCN2-210ENST00000636180 FAM50AQ14320 339 aaKnown RBP25.07■■□□□ 1.6
CLCN2-210ENST00000636180 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
CLCN2-210ENST00000636180 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
CLCN2-210ENST00000636180 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
CLCN2-210ENST00000636180 RAB3GAP2Q9H2M9 1393 aa24.97■■□□□ 1.59
CLCN2-210ENST00000636180 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
CLCN2-210ENST00000636180 SIN3AQ96ST3 1273 aa24.96■■□□□ 1.59
CLCN2-210ENST00000636180 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
CLCN2-210ENST00000636180 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
CLCN2-210ENST00000636180 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
CLCN2-210ENST00000636180 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms