RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-222ENST00000638134 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
CLCN2-222ENST00000638134 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
CLCN2-222ENST00000638134 ABCC9O60706 1549 aa27.8■■■□□ 2.04
CLCN2-222ENST00000638134 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
CLCN2-222ENST00000638134 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
CLCN2-222ENST00000638134 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
CLCN2-222ENST00000638134 NACADO15069 1562 aa26.87■■□□□ 1.89
CLCN2-222ENST00000638134 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
CLCN2-222ENST00000638134 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
CLCN2-222ENST00000638134 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
CLCN2-222ENST00000638134 HRCP23327 699 aa26.48■■□□□ 1.83
CLCN2-222ENST00000638134 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
CLCN2-222ENST00000638134 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
CLCN2-222ENST00000638134 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
CLCN2-222ENST00000638134 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
CLCN2-222ENST00000638134 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
CLCN2-222ENST00000638134 MYT1Q01538 1121 aa25.6■■□□□ 1.69
CLCN2-222ENST00000638134 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
CLCN2-222ENST00000638134 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
CLCN2-222ENST00000638134 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
CLCN2-222ENST00000638134 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
CLCN2-222ENST00000638134 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
CLCN2-222ENST00000638134 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
CLCN2-222ENST00000638134 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
CLCN2-222ENST00000638134 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
CLCN2-222ENST00000638134 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
CLCN2-222ENST00000638134 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
CLCN2-222ENST00000638134 WIZO95785 1651 aa25.11■■□□□ 1.61
CLCN2-222ENST00000638134 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
CLCN2-222ENST00000638134 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
CLCN2-222ENST00000638134 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
CLCN2-222ENST00000638134 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
CLCN2-222ENST00000638134 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.59
CLCN2-222ENST00000638134 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
CLCN2-222ENST00000638134 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
CLCN2-222ENST00000638134 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
CLCN2-222ENST00000638134 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
CLCN2-222ENST00000638134 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
CLCN2-222ENST00000638134 TOP2AP11388 1531 aaKnown RBP24.75■■□□□ 1.55
CLCN2-222ENST00000638134 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
CLCN2-222ENST00000638134 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CLCN2-222ENST00000638134 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
CLCN2-222ENST00000638134 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
CLCN2-222ENST00000638134 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
CLCN2-222ENST00000638134 NESP48681 1621 aa24.26■■□□□ 1.47
CLCN2-222ENST00000638134 CENPBP07199 599 aaPredicted RBP24.22■■□□□ 1.47
CLCN2-222ENST00000638134 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.47
CLCN2-222ENST00000638134 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
CLCN2-222ENST00000638134 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
CLCN2-222ENST00000638134 CFTRP13569 1480 aa24.16■■□□□ 1.46
CLCN2-222ENST00000638134 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
CLCN2-222ENST00000638134 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
CLCN2-222ENST00000638134 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
CLCN2-222ENST00000638134 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
CLCN2-222ENST00000638134 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
CLCN2-222ENST00000638134 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
CLCN2-222ENST00000638134 DIEXFQ68CQ4 756 aaKnown RBP23.84■■□□□ 1.41
CLCN2-222ENST00000638134 ERCC6Q03468 1493 aa23.83■■□□□ 1.4
CLCN2-222ENST00000638134 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.4
CLCN2-222ENST00000638134 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
CLCN2-222ENST00000638134 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
CLCN2-222ENST00000638134 CUX1P39880 1505 aa23.71■■□□□ 1.39
CLCN2-222ENST00000638134 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
CLCN2-222ENST00000638134 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
CLCN2-222ENST00000638134 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
CLCN2-222ENST00000638134 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
CLCN2-222ENST00000638134 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
CLCN2-222ENST00000638134 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
CLCN2-222ENST00000638134 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
CLCN2-222ENST00000638134 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.37
CLCN2-222ENST00000638134 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
CLCN2-222ENST00000638134 WDR62O43379 1518 aa23.54■■□□□ 1.36
CLCN2-222ENST00000638134 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
CLCN2-222ENST00000638134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
CLCN2-222ENST00000638134 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
CLCN2-222ENST00000638134 BCL11AQ9H165 835 aa23.47■■□□□ 1.35
CLCN2-222ENST00000638134 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
CLCN2-222ENST00000638134 CUX2O14529 1486 aa23.41■■□□□ 1.34
CLCN2-222ENST00000638134 SOGA1O94964 1423 aa23.39■■□□□ 1.33
CLCN2-222ENST00000638134 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
CLCN2-222ENST00000638134 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
CLCN2-222ENST00000638134 ANP32EQ9BTT0 268 aa23.35■■□□□ 1.33
CLCN2-222ENST00000638134 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
CLCN2-222ENST00000638134 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
CLCN2-222ENST00000638134 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
CLCN2-222ENST00000638134 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
CLCN2-222ENST00000638134 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
CLCN2-222ENST00000638134 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
CLCN2-222ENST00000638134 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
CLCN2-222ENST00000638134 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
CLCN2-222ENST00000638134 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
CLCN2-222ENST00000638134 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.312e-6■■■■■ 28.2
CLCN2-222ENST00000638134 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
CLCN2-222ENST00000638134 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
CLCN2-222ENST00000638134 EHMT2Q96KQ7 1210 aa23.12■■□□□ 1.29
CLCN2-222ENST00000638134 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
CLCN2-222ENST00000638134 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
CLCN2-222ENST00000638134 MIER1Q8N108 512 aa23.11■■□□□ 1.29
CLCN2-222ENST00000638134 IGF1RP08069 1367 aa23.06■■□□□ 1.28
CLCN2-222ENST00000638134 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms