RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
CALD1-211ENST00000445569 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
CALD1-211ENST00000445569 ABCC9O60706 1549 aa19.84■□□□□ 0.77
CALD1-211ENST00000445569 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
CALD1-211ENST00000445569 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
CALD1-211ENST00000445569 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
CALD1-211ENST00000445569 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
CALD1-211ENST00000445569 NACADO15069 1562 aa19.02■□□□□ 0.63
CALD1-211ENST00000445569 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
CALD1-211ENST00000445569 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
CALD1-211ENST00000445569 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
CALD1-211ENST00000445569 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
CALD1-211ENST00000445569 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
CALD1-211ENST00000445569 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
CALD1-211ENST00000445569 BICRAQ9NZM4 1560 aa18.35■□□□□ 0.53
CALD1-211ENST00000445569 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
CALD1-211ENST00000445569 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
CALD1-211ENST00000445569 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
CALD1-211ENST00000445569 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
CALD1-211ENST00000445569 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
CALD1-211ENST00000445569 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
CALD1-211ENST00000445569 WIZO95785 1651 aa17.92■□□□□ 0.46
CALD1-211ENST00000445569 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
CALD1-211ENST00000445569 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
CALD1-211ENST00000445569 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
CALD1-211ENST00000445569 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
CALD1-211ENST00000445569 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
CALD1-211ENST00000445569 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
CALD1-211ENST00000445569 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
CALD1-211ENST00000445569 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
CALD1-211ENST00000445569 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
CALD1-211ENST00000445569 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
CALD1-211ENST00000445569 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CALD1-211ENST00000445569 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
CALD1-211ENST00000445569 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
CALD1-211ENST00000445569 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
CALD1-211ENST00000445569 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
CALD1-211ENST00000445569 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
CALD1-211ENST00000445569 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
CALD1-211ENST00000445569 CFTRP13569 1480 aa17.11■□□□□ 0.33
CALD1-211ENST00000445569 NESP48681 1621 aa17.08■□□□□ 0.32
CALD1-211ENST00000445569 EEA1Q15075 1411 aa17.07■□□□□ 0.32
CALD1-211ENST00000445569 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
CALD1-211ENST00000445569 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
CALD1-211ENST00000445569 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
CALD1-211ENST00000445569 CUX2O14529 1486 aa17.03■□□□□ 0.32
CALD1-211ENST00000445569 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
CALD1-211ENST00000445569 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
CALD1-211ENST00000445569 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
CALD1-211ENST00000445569 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
CALD1-211ENST00000445569 CUX1P39880 1505 aa16.9■□□□□ 0.3
CALD1-211ENST00000445569 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
CALD1-211ENST00000445569 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
CALD1-211ENST00000445569 SOGA1O94964 1423 aa16.85■□□□□ 0.29
CALD1-211ENST00000445569 KIF21BO75037 1637 aa16.85■□□□□ 0.29
CALD1-211ENST00000445569 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
CALD1-211ENST00000445569 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
CALD1-211ENST00000445569 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
CALD1-211ENST00000445569 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CALD1-211ENST00000445569 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
CALD1-211ENST00000445569 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
CALD1-211ENST00000445569 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
CALD1-211ENST00000445569 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
CALD1-211ENST00000445569 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
CALD1-211ENST00000445569 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
CALD1-211ENST00000445569 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
CALD1-211ENST00000445569 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
CALD1-211ENST00000445569 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
CALD1-211ENST00000445569 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
CALD1-211ENST00000445569 WDR62O43379 1518 aa16.66■□□□□ 0.26
CALD1-211ENST00000445569 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
CALD1-211ENST00000445569 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
CALD1-211ENST00000445569 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
CALD1-211ENST00000445569 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
CALD1-211ENST00000445569 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
CALD1-211ENST00000445569 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
CALD1-211ENST00000445569 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
CALD1-211ENST00000445569 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
CALD1-211ENST00000445569 CUL7Q14999 1698 aa16.53■□□□□ 0.24
CALD1-211ENST00000445569 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
CALD1-211ENST00000445569 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
CALD1-211ENST00000445569 CLIP1P30622 1438 aa16.46■□□□□ 0.23
CALD1-211ENST00000445569 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
CALD1-211ENST00000445569 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
CALD1-211ENST00000445569 IGF1RP08069 1367 aa16.42■□□□□ 0.22
CALD1-211ENST00000445569 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
CALD1-211ENST00000445569 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
CALD1-211ENST00000445569 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
CALD1-211ENST00000445569 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
CALD1-211ENST00000445569 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
CALD1-211ENST00000445569 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
CALD1-211ENST00000445569 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
CALD1-211ENST00000445569 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
CALD1-211ENST00000445569 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
CALD1-211ENST00000445569 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
CALD1-211ENST00000445569 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
CALD1-211ENST00000445569 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
CALD1-211ENST00000445569 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
CALD1-211ENST00000445569 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
CALD1-211ENST00000445569 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms