RNA–Protein interactions for RNA: ENST00000637392.1

CLCN2-219, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,615 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-219ENST00000637392 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
CLCN2-219ENST00000637392 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
CLCN2-219ENST00000637392 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
CLCN2-219ENST00000637392 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
CLCN2-219ENST00000637392 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
CLCN2-219ENST00000637392 HRCP23327 699 aa16.48■□□□□ 0.23
CLCN2-219ENST00000637392 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
CLCN2-219ENST00000637392 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
CLCN2-219ENST00000637392 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
CLCN2-219ENST00000637392 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
CLCN2-219ENST00000637392 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
CLCN2-219ENST00000637392 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
CLCN2-219ENST00000637392 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
CLCN2-219ENST00000637392 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
CLCN2-219ENST00000637392 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
CLCN2-219ENST00000637392 ABCC9O60706 1549 aa16.01■□□□□ 0.15
CLCN2-219ENST00000637392 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
CLCN2-219ENST00000637392 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
CLCN2-219ENST00000637392 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
CLCN2-219ENST00000637392 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
CLCN2-219ENST00000637392 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
CLCN2-219ENST00000637392 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.11
CLCN2-219ENST00000637392 MYT1Q01538 1121 aa15.75■□□□□ 0.11
CLCN2-219ENST00000637392 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLCN2-219ENST00000637392 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
CLCN2-219ENST00000637392 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
CLCN2-219ENST00000637392 APLP2Q06481 763 aa15.63■□□□□ 0.09
CLCN2-219ENST00000637392 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
CLCN2-219ENST00000637392 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
CLCN2-219ENST00000637392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
CLCN2-219ENST00000637392 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
CLCN2-219ENST00000637392 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
CLCN2-219ENST00000637392 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
CLCN2-219ENST00000637392 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
CLCN2-219ENST00000637392 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
CLCN2-219ENST00000637392 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
CLCN2-219ENST00000637392 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
CLCN2-219ENST00000637392 NEFLP07196 543 aa15.21■□□□□ 0.03
CLCN2-219ENST00000637392 NACADO15069 1562 aa15.18■□□□□ 0.02
CLCN2-219ENST00000637392 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
CLCN2-219ENST00000637392 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
CLCN2-219ENST00000637392 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
CLCN2-219ENST00000637392 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
CLCN2-219ENST00000637392 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0
CLCN2-219ENST00000637392 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
CLCN2-219ENST00000637392 ITGAEP38570 1179 aa14.96□□□□□ -0.01
CLCN2-219ENST00000637392 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
CLCN2-219ENST00000637392 DAXXQ9UER7 740 aaPredicted RBP14.83□□□□□ -0.04
CLCN2-219ENST00000637392 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
CLCN2-219ENST00000637392 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
CLCN2-219ENST00000637392 MIER1Q8N108 512 aa14.81□□□□□ -0.04
CLCN2-219ENST00000637392 BCANQ96GW7 911 aa14.76□□□□□ -0.05
CLCN2-219ENST00000637392 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
CLCN2-219ENST00000637392 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
CLCN2-219ENST00000637392 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
CLCN2-219ENST00000637392 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
CLCN2-219ENST00000637392 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
CLCN2-219ENST00000637392 WIZO95785 1651 aa14.65□□□□□ -0.06
CLCN2-219ENST00000637392 EEA1Q15075 1411 aa14.64□□□□□ -0.07
CLCN2-219ENST00000637392 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
CLCN2-219ENST00000637392 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
CLCN2-219ENST00000637392 CLIP1P30622 1438 aa14.59□□□□□ -0.07
CLCN2-219ENST00000637392 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
CLCN2-219ENST00000637392 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
CLCN2-219ENST00000637392 ANP32CO43423 234 aa14.59□□□□□ -0.07
CLCN2-219ENST00000637392 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
CLCN2-219ENST00000637392 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
CLCN2-219ENST00000637392 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
CLCN2-219ENST00000637392 FKBP8Q14318 412 aa14.54□□□□□ -0.08
CLCN2-219ENST00000637392 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
CLCN2-219ENST00000637392 SOGA1O94964 1423 aa14.52□□□□□ -0.09
CLCN2-219ENST00000637392 POLR3GLQ9BT43 218 aa14.52□□□□□ -0.09
CLCN2-219ENST00000637392 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
CLCN2-219ENST00000637392 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
CLCN2-219ENST00000637392 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
CLCN2-219ENST00000637392 FBLN2P98095 1184 aa14.45□□□□□ -0.1
CLCN2-219ENST00000637392 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
CLCN2-219ENST00000637392 EIF5BO60841 1220 aaKnown RBP14.44□□□□□ -0.1
CLCN2-219ENST00000637392 SUPT16HQ9Y5B9 1047 aaKnown RBP14.43□□□□□ -0.1
CLCN2-219ENST00000637392 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
CLCN2-219ENST00000637392 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
CLCN2-219ENST00000637392 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
CLCN2-219ENST00000637392 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
CLCN2-219ENST00000637392 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
CLCN2-219ENST00000637392 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
CLCN2-219ENST00000637392 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
CLCN2-219ENST00000637392 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
CLCN2-219ENST00000637392 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
CLCN2-219ENST00000637392 HNRNPUQ00839 825 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLCN2-219ENST00000637392 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
CLCN2-219ENST00000637392 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
CLCN2-219ENST00000637392 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
CLCN2-219ENST00000637392 CCNB3Q8WWL7 1395 aa14.2□□□□□ -0.14
CLCN2-219ENST00000637392 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
CLCN2-219ENST00000637392 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
CLCN2-219ENST00000637392 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
CLCN2-219ENST00000637392 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
CLCN2-219ENST00000637392 ZNF326Q5BKZ1 582 aaKnown RBP14.15□□□□□ -0.14
CLCN2-219ENST00000637392 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
CLCN2-219ENST00000637392 CUX2O14529 1486 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms