Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCP4L1A6NKN8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCP4L1A6NKN8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 AC116562.4-201ENST00000641316 2276 ntBASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCP4L1A6NKN8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCP4L1A6NKN8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCP4L1A6NKN8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms