Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 AC098818.2-201ENST00000564925 2320 ntBASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-2A0A087WT02 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-2A0A087WT02 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 PCDHAC2-203ENST00000615316 3011 ntBASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 AC092171.4-201ENST00000609130 632 ntBASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-2A0A087WT02 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-2A0A087WT02 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 SRD5A1P1-201ENST00000442297 786 ntBASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-2A0A087WT02 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms