Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 AP005212.1-201ENST00000581547 1997 ntBASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 KRT18P10-201ENST00000388836 1287 ntBASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 RPS2P7-201ENST00000447334 885 ntBASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88Q6PEY1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 AC087393.1-201ENST00000582896 145 ntBASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 AC073314.1-201ENST00000568729 2216 ntBASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 AC116562.4-201ENST00000641316 2276 ntBASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88Q6PEY1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM88Q6PEY1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM88Q6PEY1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.83■□□□□ 0.29
TMEM88Q6PEY1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88Q6PEY1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 YBX1P4-201ENST00000392794 808 ntBASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 PVT1_1.1-201ENST00000615125 194 ntBASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88Q6PEY1 AC007613.1-201ENST00000572811 2597 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms