Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 AP005212.1-201ENST00000581547 1997 ntBASIC20.03■□□□□ 0.8
POLR2JP52435 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
POLR2JP52435 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2JP52435 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2JP52435 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR2JP52435 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
POLR2JP52435 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2JP52435 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2JP52435 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2JP52435 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2JP52435 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2JP52435 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2JP52435 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
POLR2JP52435 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
POLR2JP52435 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR2JP52435 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR2JP52435 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2JP52435 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
POLR2JP52435 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2JP52435 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR2JP52435 AC073314.1-201ENST00000568729 2216 ntBASIC20.02■□□□□ 0.79
POLR2JP52435 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR2JP52435 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.01■□□□□ 0.79
POLR2JP52435 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
POLR2JP52435 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.01■□□□□ 0.79
POLR2JP52435 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
POLR2JP52435 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
POLR2JP52435 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
POLR2JP52435 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.01■□□□□ 0.79
POLR2JP52435 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2JP52435 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20■□□□□ 0.79
POLR2JP52435 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20■□□□□ 0.79
POLR2JP52435 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
POLR2JP52435 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20■□□□□ 0.79
POLR2JP52435 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
POLR2JP52435 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2JP52435 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
POLR2JP52435 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20■□□□□ 0.79
POLR2JP52435 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
POLR2JP52435 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
POLR2JP52435 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
POLR2JP52435 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR2JP52435 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR2JP52435 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
POLR2JP52435 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
POLR2JP52435 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 AC121338.2-201ENST00000622535 1744 ntBASIC19.99■□□□□ 0.79
POLR2JP52435 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2JP52435 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
POLR2JP52435 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR2JP52435 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2JP52435 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
POLR2JP52435 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms