Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CILPO75339 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.33■■□□□ 1.17
CILPO75339 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.33■■□□□ 1.17
CILPO75339 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CILPO75339 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.33■■□□□ 1.17
CILPO75339 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.33■■□□□ 1.16
CILPO75339 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CILPO75339 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CILPO75339 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CILPO75339 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.32■■□□□ 1.16
CILPO75339 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.32■■□□□ 1.16
CILPO75339 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.32■■□□□ 1.16
CILPO75339 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.32■■□□□ 1.16
CILPO75339 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.32■■□□□ 1.16
CILPO75339 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CILPO75339 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CILPO75339 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.32■■□□□ 1.16
CILPO75339 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CILPO75339 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CILPO75339 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CILPO75339 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CILPO75339 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CILPO75339 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CILPO75339 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CILPO75339 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CILPO75339 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.31■■□□□ 1.16
CILPO75339 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.31■■□□□ 1.16
CILPO75339 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CILPO75339 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.31■■□□□ 1.16
CILPO75339 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.31■■□□□ 1.16
CILPO75339 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.31■■□□□ 1.16
CILPO75339 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CILPO75339 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.31■■□□□ 1.16
CILPO75339 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CILPO75339 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.3■■□□□ 1.16
CILPO75339 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CILPO75339 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.3■■□□□ 1.16
CILPO75339 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.3■■□□□ 1.16
CILPO75339 AL024507.2-201ENST00000606070 2574 ntBASIC22.3■■□□□ 1.16
CILPO75339 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CILPO75339 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 FEM1AP4-201ENST00000443167 1987 ntBASIC22.29■■□□□ 1.16
CILPO75339 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.29■■□□□ 1.16
CILPO75339 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CILPO75339 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CILPO75339 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CILPO75339 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.28■■□□□ 1.16
CILPO75339 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.28■■□□□ 1.16
CILPO75339 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.28■■□□□ 1.16
CILPO75339 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.28■■□□□ 1.16
CILPO75339 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CILPO75339 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.28■■□□□ 1.16
CILPO75339 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 MFSD11-216ENST00000590393 1141 ntBASIC22.28■■□□□ 1.16
CILPO75339 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.28■■□□□ 1.16
CILPO75339 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CILPO75339 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.28■■□□□ 1.16
CILPO75339 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.28■■□□□ 1.16
CILPO75339 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CILPO75339 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CILPO75339 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.27■■□□□ 1.16
CILPO75339 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.27■■□□□ 1.16
CILPO75339 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.27■■□□□ 1.16
CILPO75339 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.27■■□□□ 1.16
CILPO75339 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
CILPO75339 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.27■■□□□ 1.16
CILPO75339 RARRES2P11-201ENST00000635158 484 ntBASIC22.27■■□□□ 1.16
CILPO75339 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.27■■□□□ 1.16
CILPO75339 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CILPO75339 AC007375.3-201ENST00000600936 2314 ntBASIC22.26■■□□□ 1.15
CILPO75339 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CILPO75339 AC090192.1-201ENST00000517740 490 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms