Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.6■□□□□ 0.255e-7■■□□□ 12.7
NKRFO15226 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.23e-7■■□□□ 12.7
NKRFO15226 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.843e-7■■□□□ 12.7
NKRFO15226 CLUH-211ENST00000575014 4959 ntAPPRIS ALT2 TSL 518.52■□□□□ 0.561e-8■■□□□ 12.7
NKRFO15226 SPESP1-202ENST00000560188 621 ntTSL 214.08□□□□□ -0.162e-6■■□□□ 12.7
NKRFO15226 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.167e-7■■□□□ 12.7
NKRFO15226 LRP5-206ENST00000529993 5103 ntTSL 1 (best)15.33■□□□□ 0.047e-7■■□□□ 12.7
NKRFO15226 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.26■□□□□ 0.039e-7■■□□□ 12.7
NKRFO15226 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.029e-7■■□□□ 12.7
NKRFO15226 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 09e-7■■□□□ 12.7
NKRFO15226 DAZAP1-209ENST00000590419 508 ntTSL 316.93■□□□□ 0.34e-7■■□□□ 12.7
NKRFO15226 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.08■■□□□ 1.457e-10■■□□□ 12.7
NKRFO15226 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.91■■□□□ 1.91e-6■■□□□ 12.7
NKRFO15226 FGD5-AS1-201ENST00000417835 1630 ntTSL 1 (best)26.04■■□□□ 1.761e-6■■□□□ 12.7
NKRFO15226 FGD5-AS1-203ENST00000426200 1874 ntTSL 1 (best)24■■□□□ 1.431e-6■■□□□ 12.7
NKRFO15226 EPHA2-204ENST00000480202 795 ntTSL 520.76■□□□□ 0.911e-8■■□□□ 12.7
NKRFO15226 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.475e-7■■□□□ 12.6
NKRFO15226 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.35■□□□□ 0.531e-9■■□□□ 12.6
NKRFO15226 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC14.26□□□□□ -0.131e-9■■□□□ 12.6
NKRFO15226 AC006001.2-203ENST00000428557 304 ntTSL 313.71□□□□□ -0.211e-9■■□□□ 12.6
NKRFO15226 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.435e-11■■□□□ 12.6
NKRFO15226 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.87■■■□□ 2.375e-11■■□□□ 12.6
NKRFO15226 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.78■■■□□ 2.365e-11■■□□□ 12.6
NKRFO15226 FTCD-212ENST00000498355 1936 ntTSL 229.52■■■□□ 2.325e-11■■□□□ 12.6
NKRFO15226 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.115e-11■■□□□ 12.6
NKRFO15226 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.813e-12■■□□□ 12.6
NKRFO15226 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.3■□□□□ 0.843e-12■■□□□ 12.6
NKRFO15226 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC11.42□□□□□ -0.583e-12■■□□□ 12.6
NKRFO15226 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.76□□□□□ -0.693e-12■■□□□ 12.6
NKRFO15226 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)9.67□□□□□ -0.863e-12■■□□□ 12.6
NKRFO15226 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.93■■■□□ 2.862e-7■■□□□ 12.6
NKRFO15226 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.565e-7■■□□□ 12.6
NKRFO15226 CTIF-209ENST00000591387 859 ntTSL 220.98■□□□□ 0.955e-7■■□□□ 12.6
NKRFO15226 CTIF-203ENST00000587752 683 ntTSL 517.44■□□□□ 0.385e-7■■□□□ 12.6
NKRFO15226 CTIF-210ENST00000591412 491 ntTSL 315.51■□□□□ 0.075e-7■■□□□ 12.6
NKRFO15226 LIFR-205ENST00000506990 760 ntTSL 324.26■■□□□ 1.474e-8■■□□□ 12.6
NKRFO15226 LIFR-208ENST00000511561 574 ntTSL 422.4■■□□□ 1.184e-8■■□□□ 12.6
NKRFO15226 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.097e-14■■□□□ 12.6
NKRFO15226 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.854e-8■■□□□ 12.6
NKRFO15226 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.12■□□□□ 0.814e-8■■□□□ 12.6
NKRFO15226 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.61■□□□□ 0.734e-8■■□□□ 12.6
NKRFO15226 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.544e-8■■□□□ 12.6
NKRFO15226 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.487e-14■■□□□ 12.6
NKRFO15226 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.454e-8■■□□□ 12.6
NKRFO15226 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.67■□□□□ 0.424e-8■■□□□ 12.6
NKRFO15226 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.44e-8■■□□□ 12.6
NKRFO15226 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.294e-8■■□□□ 12.6
NKRFO15226 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.034e-8■■□□□ 12.6
NKRFO15226 HYAL1-205ENST00000418723 567 ntTSL 414.7□□□□□ -0.064e-8■■□□□ 12.6
NKRFO15226 HYAL1-207ENST00000452672 561 ntTSL 414.28□□□□□ -0.124e-8■■□□□ 12.6
NKRFO15226 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.87e-14■■□□□ 12.6
NKRFO15226 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.94e-8■■□□□ 12.6
NKRFO15226 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.83□□□□□ -1.164e-8■■□□□ 12.6
NKRFO15226 LIFR-203ENST00000503088 2371 ntTSL 1 (best)7.68□□□□□ -1.184e-8■■□□□ 12.6
NKRFO15226 USP34-204ENST00000453133 1409 ntTSL 57.49□□□□□ -1.211e-26■■□□□ 12.6
NKRFO15226 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.631e-26■■□□□ 12.6
NKRFO15226 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.034e-8■■□□□ 12.6
NKRFO15226 CLIP1-211ENST00000539080 560 ntTSL 422.04■■□□□ 1.126e-6■■□□□ 12.6
NKRFO15226 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.56e-6■■□□□ 12.6
NKRFO15226 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC11.51□□□□□ -0.576e-6■■□□□ 12.6
NKRFO15226 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.686e-6■■□□□ 12.6
NKRFO15226 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.766e-6■■□□□ 12.6
NKRFO15226 R3HDM2-208ENST00000448732 195 ntTSL 1 (best)27.2■■□□□ 1.941e-6■■□□□ 12.6
NKRFO15226 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.31e-6■■□□□ 12.6
NKRFO15226 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.49□□□□□ -0.091e-6■■□□□ 12.6
NKRFO15226 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.171e-6■■□□□ 12.6
NKRFO15226 APLP2-221ENST00000533713 560 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-224ENST00000534582 556 ntTSL 524.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-208ENST00000526330 582 ntTSL 324.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-214ENST00000530132 542 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-218ENST00000533532 584 ntTSL 224.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-223ENST00000534001 585 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-220ENST00000533618 574 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-213ENST00000529701 573 ntTSL 524.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-217ENST00000533195 560 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-209ENST00000527702 579 ntTSL 424.46■■□□□ 1.513e-8■■□□□ 12.6
NKRFO15226 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.98■■□□□ 1.273e-8■■□□□ 12.6
NKRFO15226 APLP2-216ENST00000532456 664 ntTSL 422.74■■□□□ 1.233e-8■■□□□ 12.6
NKRFO15226 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.99■□□□□ 0.953e-8■■□□□ 12.6
NKRFO15226 APLP2-219ENST00000533616 2041 ntTSL 220.89■□□□□ 0.933e-8■■□□□ 12.6
NKRFO15226 APLP2-225ENST00000534761 551 ntTSL 519.56■□□□□ 0.723e-8■■□□□ 12.6
NKRFO15226 APLP2-211ENST00000529235 537 ntTSL 417.08■□□□□ 0.323e-8■■□□□ 12.6
NKRFO15226 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.123e-8■■□□□ 12.6
NKRFO15226 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.13e-8■■□□□ 12.6
NKRFO15226 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.09■□□□□ 0.811e-7■■□□□ 12.6
NKRFO15226 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.761e-7■■□□□ 12.6
NKRFO15226 RREB1-205ENST00000467782 243 ntTSL 518.72■□□□□ 0.591e-7■■□□□ 12.6
NKRFO15226 RREB1-206ENST00000471433 1021 ntTSL 516.06■□□□□ 0.161e-7■■□□□ 12.6
NKRFO15226 RREB1-209ENST00000491191 998 ntTSL 516.06■□□□□ 0.161e-7■■□□□ 12.6
NKRFO15226 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.141e-7■■□□□ 12.6
NKRFO15226 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.83□□□□□ -0.191e-7■■□□□ 12.6
NKRFO15226 ATL2-211ENST00000456736 578 ntTSL 319.9■□□□□ 0.786e-8■■□□□ 12.6
NKRFO15226 ATL2-205ENST00000416222 593 ntTSL 419.05■□□□□ 0.646e-8■■□□□ 12.6
NKRFO15226 ATL2-212ENST00000472097 561 ntTSL 319.05■□□□□ 0.646e-8■■□□□ 12.6
NKRFO15226 ATL2-208ENST00000449130 526 ntTSL 318.41■□□□□ 0.546e-8■■□□□ 12.6
NKRFO15226 ATL2-209ENST00000451483 576 ntTSL 416.12■□□□□ 0.176e-8■■□□□ 12.6
NKRFO15226 ATL2-203ENST00000405384 1905 ntTSL 1 (best)15.25■□□□□ 0.036e-8■■□□□ 12.6
NKRFO15226 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.016e-8■■□□□ 12.6
NKRFO15226 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC13.93□□□□□ -0.186e-8■■□□□ 12.6
NKRFO15226 ATL2-207ENST00000443098 775 ntTSL 513.49□□□□□ -0.256e-8■■□□□ 12.6
Retrieved 100 of 9,198 protein–RNA pairs in 111.1 ms