RNA–Protein interactions for RNA: ENST00000503088.1

LIFR-203, Transcript of LIF receptor alpha, humanhuman

TSL 1 (best)

Gene LIFR, Length 2,371 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-203ENST00000503088 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
LIFR-203ENST00000503088 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
LIFR-203ENST00000503088 CCDC180Q9P1Z9 1646 aa12.78□□□□□ -0.36
LIFR-203ENST00000503088 SHROOM4Q9ULL8 1493 aa12.56□□□□□ -0.4
LIFR-203ENST00000503088 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.4
LIFR-203ENST00000503088 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
LIFR-203ENST00000503088 MYT1Q01538 1121 aa12.2□□□□□ -0.46
LIFR-203ENST00000503088 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
LIFR-203ENST00000503088 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
LIFR-203ENST00000503088 ABCC9O60706 1549 aa12.12□□□□□ -0.47
LIFR-203ENST00000503088 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
LIFR-203ENST00000503088 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
LIFR-203ENST00000503088 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
LIFR-203ENST00000503088 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
LIFR-203ENST00000503088 SCRIBQ14160 1630 aa11.99□□□□□ -0.49
LIFR-203ENST00000503088 APLP2Q06481 763 aa11.98□□□□□ -0.49
LIFR-203ENST00000503088 MYO15BQ96JP2 1530 aa11.89□□□□□ -0.51
LIFR-203ENST00000503088 NACADO15069 1562 aa11.84□□□□□ -0.51
LIFR-203ENST00000503088 ERICH6Q7L0X2 663 aa11.75□□□□□ -0.53
LIFR-203ENST00000503088 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
LIFR-203ENST00000503088 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
LIFR-203ENST00000503088 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
LIFR-203ENST00000503088 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
LIFR-203ENST00000503088 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
LIFR-203ENST00000503088 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
LIFR-203ENST00000503088 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
LIFR-203ENST00000503088 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
LIFR-203ENST00000503088 WIZO95785 1651 aa11.54□□□□□ -0.56
LIFR-203ENST00000503088 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIFR-203ENST00000503088 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
LIFR-203ENST00000503088 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
LIFR-203ENST00000503088 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
LIFR-203ENST00000503088 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
LIFR-203ENST00000503088 SMARCA4P51532 1647 aa11.41□□□□□ -0.58
LIFR-203ENST00000503088 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
LIFR-203ENST00000503088 AEBP2Q6ZN18 517 aaPredicted RBP11.29□□□□□ -0.6
LIFR-203ENST00000503088 TRIM41Q8WV44 630 aa11.29□□□□□ -0.6
LIFR-203ENST00000503088 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
LIFR-203ENST00000503088 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
LIFR-203ENST00000503088 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
LIFR-203ENST00000503088 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
LIFR-203ENST00000503088 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
LIFR-203ENST00000503088 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
LIFR-203ENST00000503088 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
LIFR-203ENST00000503088 ARXQ96QS3 562 aa11.17□□□□□ -0.62
LIFR-203ENST00000503088 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
LIFR-203ENST00000503088 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
LIFR-203ENST00000503088 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
LIFR-203ENST00000503088 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
LIFR-203ENST00000503088 HRCP23327 699 aa11.05□□□□□ -0.64
LIFR-203ENST00000503088 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
LIFR-203ENST00000503088 PCGF6Q9BYE7 350 aa11.03□□□□□ -0.64
LIFR-203ENST00000503088 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
LIFR-203ENST00000503088 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
LIFR-203ENST00000503088 SOGA1O94964 1423 aa10.99□□□□□ -0.65
LIFR-203ENST00000503088 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
LIFR-203ENST00000503088 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
LIFR-203ENST00000503088 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
LIFR-203ENST00000503088 NCAPD3P42695 1498 aa10.96□□□□□ -0.65
LIFR-203ENST00000503088 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.66
LIFR-203ENST00000503088 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
LIFR-203ENST00000503088 CC2D2AQ9P2K1 1620 aa10.91□□□□□ -0.66
LIFR-203ENST00000503088 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
LIFR-203ENST00000503088 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
LIFR-203ENST00000503088 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
LIFR-203ENST00000503088 KCNA4P22459 653 aa10.87□□□□□ -0.67
LIFR-203ENST00000503088 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
LIFR-203ENST00000503088 TRIM26Q12899 539 aaPredicted RBP10.82□□□□□ -0.68
LIFR-203ENST00000503088 TOP2BQ02880 1626 aa10.82□□□□□ -0.68
LIFR-203ENST00000503088 CFTRP13569 1480 aa10.81□□□□□ -0.68
LIFR-203ENST00000503088 CUX1P39880 1505 aa10.8□□□□□ -0.68
LIFR-203ENST00000503088 UBTFP17480 764 aaKnown RBP10.8□□□□□ -0.68
LIFR-203ENST00000503088 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
LIFR-203ENST00000503088 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
LIFR-203ENST00000503088 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
LIFR-203ENST00000503088 HOMEZQ8IX15 550 aa10.77□□□□□ -0.68
LIFR-203ENST00000503088 EEA1Q15075 1411 aa10.77□□□□□ -0.68
LIFR-203ENST00000503088 PRDM2Q13029 1718 aa10.77□□□□□ -0.68
LIFR-203ENST00000503088 GOLGA3Q08378 1498 aa10.74□□□□□ -0.69
LIFR-203ENST00000503088 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
LIFR-203ENST00000503088 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
LIFR-203ENST00000503088 NESP48681 1621 aa10.74□□□□□ -0.69
LIFR-203ENST00000503088 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
LIFR-203ENST00000503088 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
LIFR-203ENST00000503088 KIF21BO75037 1637 aa10.72□□□□□ -0.69
LIFR-203ENST00000503088 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
LIFR-203ENST00000503088 CEP164Q9UPV0 1460 aa10.71□□□□□ -0.7
LIFR-203ENST00000503088 FANCD2Q9BXW9 1451 aa10.66□□□□□ -0.7
LIFR-203ENST00000503088 FGD5Q6ZNL6 1462 aa10.64□□□□□ -0.71
LIFR-203ENST00000503088 CLIP1P30622 1438 aa10.63□□□□□ -0.71
LIFR-203ENST00000503088 KIF27Q86VH2 1401 aa10.62□□□□□ -0.71
LIFR-203ENST00000503088 CUX2O14529 1486 aa10.62□□□□□ -0.71
LIFR-203ENST00000503088 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
LIFR-203ENST00000503088 RAD54L2Q9Y4B4 1467 aa10.59□□□□□ -0.71
LIFR-203ENST00000503088 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
LIFR-203ENST00000503088 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
LIFR-203ENST00000503088 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
LIFR-203ENST00000503088 IGF1RP08069 1367 aa10.56□□□□□ -0.72
LIFR-203ENST00000503088 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
LIFR-203ENST00000503088 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms