RNA–Protein interactions for RNA: ENST00000634871.1

R3HDM2-215, Transcript of R3H domain containing 2, humanhuman

TSL 5 BASIC

Gene R3HDM2, Length 4,092 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-215ENST00000634871 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
R3HDM2-215ENST00000634871 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
R3HDM2-215ENST00000634871 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
R3HDM2-215ENST00000634871 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
R3HDM2-215ENST00000634871 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
R3HDM2-215ENST00000634871 ABCC9O60706 1549 aa24.21■■□□□ 1.47
R3HDM2-215ENST00000634871 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
R3HDM2-215ENST00000634871 NACADO15069 1562 aa23.61■■□□□ 1.37
R3HDM2-215ENST00000634871 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
R3HDM2-215ENST00000634871 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
R3HDM2-215ENST00000634871 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
R3HDM2-215ENST00000634871 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
R3HDM2-215ENST00000634871 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
R3HDM2-215ENST00000634871 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
R3HDM2-215ENST00000634871 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
R3HDM2-215ENST00000634871 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
R3HDM2-215ENST00000634871 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
R3HDM2-215ENST00000634871 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
R3HDM2-215ENST00000634871 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
R3HDM2-215ENST00000634871 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
R3HDM2-215ENST00000634871 WIZO95785 1651 aa22.36■■□□□ 1.17
R3HDM2-215ENST00000634871 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
R3HDM2-215ENST00000634871 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
R3HDM2-215ENST00000634871 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
R3HDM2-215ENST00000634871 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
R3HDM2-215ENST00000634871 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
R3HDM2-215ENST00000634871 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
R3HDM2-215ENST00000634871 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
R3HDM2-215ENST00000634871 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
R3HDM2-215ENST00000634871 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
R3HDM2-215ENST00000634871 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
R3HDM2-215ENST00000634871 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
R3HDM2-215ENST00000634871 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
R3HDM2-215ENST00000634871 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
R3HDM2-215ENST00000634871 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
R3HDM2-215ENST00000634871 LOC105371045A0A1W2PR82 267 aa21.59■■□□□ 1.05
R3HDM2-215ENST00000634871 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
R3HDM2-215ENST00000634871 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
R3HDM2-215ENST00000634871 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
R3HDM2-215ENST00000634871 CFTRP13569 1480 aa21.36■■□□□ 1.01
R3HDM2-215ENST00000634871 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
R3HDM2-215ENST00000634871 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
R3HDM2-215ENST00000634871 SOGA1O94964 1423 aa21.23■□□□□ 0.99
R3HDM2-215ENST00000634871 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
R3HDM2-215ENST00000634871 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
R3HDM2-215ENST00000634871 EEA1Q15075 1411 aa21.19■□□□□ 0.98
R3HDM2-215ENST00000634871 NESP48681 1621 aa21.17■□□□□ 0.98
R3HDM2-215ENST00000634871 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
R3HDM2-215ENST00000634871 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
R3HDM2-215ENST00000634871 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
R3HDM2-215ENST00000634871 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
R3HDM2-215ENST00000634871 CUX1P39880 1505 aa21.07■□□□□ 0.96
R3HDM2-215ENST00000634871 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
R3HDM2-215ENST00000634871 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
R3HDM2-215ENST00000634871 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
R3HDM2-215ENST00000634871 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
R3HDM2-215ENST00000634871 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
R3HDM2-215ENST00000634871 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
R3HDM2-215ENST00000634871 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
R3HDM2-215ENST00000634871 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
R3HDM2-215ENST00000634871 CUX2O14529 1486 aa20.93■□□□□ 0.94
R3HDM2-215ENST00000634871 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
R3HDM2-215ENST00000634871 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
R3HDM2-215ENST00000634871 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
R3HDM2-215ENST00000634871 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
R3HDM2-215ENST00000634871 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
R3HDM2-215ENST00000634871 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
R3HDM2-215ENST00000634871 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
R3HDM2-215ENST00000634871 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
R3HDM2-215ENST00000634871 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
R3HDM2-215ENST00000634871 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
R3HDM2-215ENST00000634871 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
R3HDM2-215ENST00000634871 KIF21BO75037 1637 aa20.75■□□□□ 0.91
R3HDM2-215ENST00000634871 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
R3HDM2-215ENST00000634871 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
R3HDM2-215ENST00000634871 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
R3HDM2-215ENST00000634871 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
R3HDM2-215ENST00000634871 APLP2Q06481 763 aa20.71■□□□□ 0.91
R3HDM2-215ENST00000634871 IGF1RP08069 1367 aa20.71■□□□□ 0.91
R3HDM2-215ENST00000634871 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
R3HDM2-215ENST00000634871 CLIP1P30622 1438 aa20.69■□□□□ 0.9
R3HDM2-215ENST00000634871 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
R3HDM2-215ENST00000634871 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
R3HDM2-215ENST00000634871 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
R3HDM2-215ENST00000634871 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
R3HDM2-215ENST00000634871 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.88
R3HDM2-215ENST00000634871 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.874e-7■■■■□ 20.6
R3HDM2-215ENST00000634871 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
R3HDM2-215ENST00000634871 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
R3HDM2-215ENST00000634871 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
R3HDM2-215ENST00000634871 WDR62O43379 1518 aa20.45■□□□□ 0.86
R3HDM2-215ENST00000634871 FBLN2P98095 1184 aa20.44■□□□□ 0.86
R3HDM2-215ENST00000634871 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
R3HDM2-215ENST00000634871 CUL7Q14999 1698 aa20.4■□□□□ 0.86
R3HDM2-215ENST00000634871 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.85
R3HDM2-215ENST00000634871 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
R3HDM2-215ENST00000634871 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
R3HDM2-215ENST00000634871 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
R3HDM2-215ENST00000634871 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
R3HDM2-215ENST00000634871 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms