RNA–Protein interactions for RNA: ENST00000506990.5

LIFR-205, Transcript of LIF receptor alpha, humanhuman

TSL 3

Gene LIFR, Length 760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-205ENST00000506990 NISCHQ9Y2I1 1504 aa51.56■■■■■ 5.84
LIFR-205ENST00000506990 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
LIFR-205ENST00000506990 ABCC9O60706 1549 aa45.82■■■■■ 4.92
LIFR-205ENST00000506990 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
LIFR-205ENST00000506990 DCAF8L2P0C7V8 631 aa43.55■■■■■ 4.56
LIFR-205ENST00000506990 NACADO15069 1562 aa43.49■■■■■ 4.55
LIFR-205ENST00000506990 MYO15BQ96JP2 1530 aa42.96■■■■■ 4.47
LIFR-205ENST00000506990 ZCCHC6Q5VYS8 1495 aaKnown RBP42.79■■■■■ 4.44
LIFR-205ENST00000506990 PABPN1Q86U42 306 aaKnown RBP eCLIP42.77■■■■■ 4.44
LIFR-205ENST00000506990 UNC13AQ9UPW8 1703 aa42.69■■■■■ 4.42
LIFR-205ENST00000506990 DNAJC5BQ9UF47 199 aa42.64■■■■■ 4.42
LIFR-205ENST00000506990 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
LIFR-205ENST00000506990 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
LIFR-205ENST00000506990 SCRIBQ14160 1630 aa42.08■■■■■ 4.33
LIFR-205ENST00000506990 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
LIFR-205ENST00000506990 CC2D2AQ9P2K1 1620 aa41.36■■■■■ 4.21
LIFR-205ENST00000506990 EIF4G1Q04637 1599 aaKnown RBP41.35■■■■■ 4.21
LIFR-205ENST00000506990 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
LIFR-205ENST00000506990 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
LIFR-205ENST00000506990 SMARCA4P51532 1647 aa40.13■■■■■ 4.02
LIFR-205ENST00000506990 ATAD2BQ9ULI0 1458 aa40.09■■■■■ 4.01
LIFR-205ENST00000506990 SMARCA2P51531 1590 aa40■■■■□ 3.99
LIFR-205ENST00000506990 BAZ1AQ9NRL2 1556 aaPredicted RBP40■■■■□ 3.99
LIFR-205ENST00000506990 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
LIFR-205ENST00000506990 MROH2BQ7Z745 1585 aa39.76■■■■□ 3.95
LIFR-205ENST00000506990 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
LIFR-205ENST00000506990 PEG3Q9GZU2 1588 aa39.69■■■■□ 3.94
LIFR-205ENST00000506990 ERCC6Q03468 1493 aa39.55■■■■□ 3.92
LIFR-205ENST00000506990 NESP48681 1621 aa39.44■■■■□ 3.9
LIFR-205ENST00000506990 WIZO95785 1651 aa39.29■■■■□ 3.88
LIFR-205ENST00000506990 CUX2O14529 1486 aa39.27■■■■□ 3.88
LIFR-205ENST00000506990 LAMC3Q9Y6N6 1575 aa39.18■■■■□ 3.86
LIFR-205ENST00000506990 RSF1Q96T23 1441 aaPredicted RBP39.06■■■■□ 3.84
LIFR-205ENST00000506990 PDS5BQ9NTI5 1447 aa38.99■■■■□ 3.83
LIFR-205ENST00000506990 CADPSQ9ULU8 1353 aa38.98■■■■□ 3.83
LIFR-205ENST00000506990 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
LIFR-205ENST00000506990 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
LIFR-205ENST00000506990 DNAJC5Q9H3Z4 198 aa38.88■■■■□ 3.81
LIFR-205ENST00000506990 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
LIFR-205ENST00000506990 MRC2Q9UBG0 1479 aa38.61■■■■□ 3.77
LIFR-205ENST00000506990 CFTRP13569 1480 aa38.58■■■■□ 3.77
LIFR-205ENST00000506990 CEP164Q9UPV0 1460 aa38.55■■■■□ 3.76
LIFR-205ENST00000506990 FANCD2Q9BXW9 1451 aa38.54■■■■□ 3.76
LIFR-205ENST00000506990 WDR62O43379 1518 aa38.47■■■■□ 3.75
LIFR-205ENST00000506990 CCDC88BA6NC98 1476 aa38.4■■■■□ 3.74
LIFR-205ENST00000506990 URB2Q14146 1524 aaKnown RBP38.19■■■■□ 3.7
LIFR-205ENST00000506990 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
LIFR-205ENST00000506990 TOPBP1Q92547 1522 aa37.84■■■■□ 3.65
LIFR-205ENST00000506990 ABCC8Q09428 1581 aa37.78■■■■□ 3.64
LIFR-205ENST00000506990 SUPT5HO00267 1087 aaKnown RBP37.75■■■■□ 3.63
LIFR-205ENST00000506990 IFT140Q96RY7 1462 aa37.75■■■■□ 3.63
LIFR-205ENST00000506990 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
LIFR-205ENST00000506990 ZNF608Q9ULD9 1512 aaPredicted RBP37.67■■■■□ 3.62
LIFR-205ENST00000506990 OSCARQ8IYS5 282 aa37.62■■■■□ 3.61
LIFR-205ENST00000506990 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
LIFR-205ENST00000506990 EIF4G3O43432 1585 aaKnown RBP37.46■■■■□ 3.59
LIFR-205ENST00000506990 TARBP1Q13395 1621 aaKnown RBP37.45■■■■□ 3.59
LIFR-205ENST00000506990 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
LIFR-205ENST00000506990 AQRO60306 1485 aaKnown RBP eCLIP37.4■■■■□ 3.58
LIFR-205ENST00000506990 RAD54L2Q9Y4B4 1467 aa37.37■■■■□ 3.57
LIFR-205ENST00000506990 SOGA1O94964 1423 aa37.36■■■■□ 3.57
LIFR-205ENST00000506990 CUX1P39880 1505 aa37.32■■■■□ 3.57
LIFR-205ENST00000506990 FGD5Q6ZNL6 1462 aa37.31■■■■□ 3.56
LIFR-205ENST00000506990 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
LIFR-205ENST00000506990 FBLN2P98095 1184 aa37.17■■■■□ 3.54
LIFR-205ENST00000506990 CHD1O14646 1710 aa37.11■■■■□ 3.53
LIFR-205ENST00000506990 WDR97A6NE52 1622 aa37.06■■■■□ 3.52
LIFR-205ENST00000506990 RIMBP3CA6NJZ7 1639 aa37.03■■■■□ 3.52
LIFR-205ENST00000506990 RIMBP3BA6NNM3 1639 aa37.03■■■■□ 3.52
LIFR-205ENST00000506990 RIMBP3Q9UFD9 1639 aa37.03■■■■□ 3.52
LIFR-205ENST00000506990 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.52
LIFR-205ENST00000506990 GRIN2BQ13224 1484 aa36.96■■■■□ 3.51
LIFR-205ENST00000506990 ARHGEF11O15085 1522 aa36.95■■■■□ 3.51
LIFR-205ENST00000506990 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
LIFR-205ENST00000506990 MAGI1Q96QZ7 1491 aaPredicted RBP36.9■■■■□ 3.5
LIFR-205ENST00000506990 GAPVD1Q14C86 1478 aa36.89■■■■□ 3.5
LIFR-205ENST00000506990 ABCA10Q8WWZ4 1543 aa36.88■■■■□ 3.49
LIFR-205ENST00000506990 WRNQ14191 1432 aaPredicted RBP eCLIP36.86■■■■□ 3.49
LIFR-205ENST00000506990 PBRM1Q86U86 1689 aa36.81■■■■□ 3.48
LIFR-205ENST00000506990 TOP2BQ02880 1626 aa36.81■■■■□ 3.48
LIFR-205ENST00000506990 SYNJ1O43426 1573 aa36.79■■■■□ 3.48
LIFR-205ENST00000506990 BIVM-ERCC5R4GMW8 1640 aa36.79■■■■□ 3.48
LIFR-205ENST00000506990 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
LIFR-205ENST00000506990 ABCA5Q8WWZ7 1642 aa36.77■■■■□ 3.48
LIFR-205ENST00000506990 CYB5RLQ6IPT4 315 aa36.75■■■■□ 3.47
LIFR-205ENST00000506990 CLASP1Q7Z460 1538 aa36.68■■■■□ 3.46
LIFR-205ENST00000506990 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
LIFR-205ENST00000506990 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
LIFR-205ENST00000506990 GRIN2AQ12879 1464 aa36.48■■■■□ 3.43
LIFR-205ENST00000506990 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
LIFR-205ENST00000506990 ERICH3Q5RHP9 1530 aa36.42■■■■□ 3.42
LIFR-205ENST00000506990 CEP170Q5SW79 1584 aa36.32■■■■□ 3.41
LIFR-205ENST00000506990 NUP160Q12769 1436 aa36.32■■■■□ 3.4
LIFR-205ENST00000506990 TRHP20396 242 aaPredicted RBP36.26■■■■□ 3.4
LIFR-205ENST00000506990 ERCC6L2Q5T890 1561 aa36.17■■■■□ 3.38
LIFR-205ENST00000506990 KIF27Q86VH2 1401 aa36.15■■■■□ 3.38
LIFR-205ENST00000506990 SHROOM2Q13796 1616 aa36.09■■■■□ 3.37
LIFR-205ENST00000506990 IGF1RP08069 1367 aa36.08■■■■□ 3.37
LIFR-205ENST00000506990 JPH4Q96JJ6 628 aa36.03■■■■□ 3.36
LIFR-205ENST00000506990 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 481.4 ms