RNA–Protein interactions for RNA: ENST00000449130.5

ATL2-208, Transcript of atlastin GTPase 2, humanhuman

TSL 3

Gene ATL2, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-208ENST00000449130 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
ATL2-208ENST00000449130 ABCC9O60706 1549 aa36.21■■■■□ 3.39
ATL2-208ENST00000449130 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
ATL2-208ENST00000449130 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
ATL2-208ENST00000449130 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
ATL2-208ENST00000449130 NACADO15069 1562 aa33.83■■■■□ 3.01
ATL2-208ENST00000449130 DCAF8L2P0C7V8 631 aa33.83■■■■□ 3.01
ATL2-208ENST00000449130 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
ATL2-208ENST00000449130 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
ATL2-208ENST00000449130 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
ATL2-208ENST00000449130 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.91
ATL2-208ENST00000449130 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
ATL2-208ENST00000449130 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
ATL2-208ENST00000449130 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
ATL2-208ENST00000449130 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
ATL2-208ENST00000449130 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
ATL2-208ENST00000449130 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
ATL2-208ENST00000449130 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
ATL2-208ENST00000449130 DNAJC5Q9H3Z4 198 aa31.98■■■□□ 2.71
ATL2-208ENST00000449130 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
ATL2-208ENST00000449130 CUX2O14529 1486 aa31.31■■■□□ 2.6
ATL2-208ENST00000449130 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
ATL2-208ENST00000449130 ATAD2BQ9ULI0 1458 aa31.15■■■□□ 2.58
ATL2-208ENST00000449130 NESP48681 1621 aa30.99■■■□□ 2.55
ATL2-208ENST00000449130 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
ATL2-208ENST00000449130 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
ATL2-208ENST00000449130 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
ATL2-208ENST00000449130 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
ATL2-208ENST00000449130 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
ATL2-208ENST00000449130 THOC2Q8NI27 1593 aaKnown RBP30.64■■■□□ 2.5
ATL2-208ENST00000449130 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
ATL2-208ENST00000449130 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
ATL2-208ENST00000449130 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
ATL2-208ENST00000449130 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
ATL2-208ENST00000449130 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
ATL2-208ENST00000449130 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
ATL2-208ENST00000449130 CADPSQ9ULU8 1353 aa30.38■■■□□ 2.45
ATL2-208ENST00000449130 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
ATL2-208ENST00000449130 WDR62O43379 1518 aa30.14■■■□□ 2.42
ATL2-208ENST00000449130 WIZO95785 1651 aa30.12■■■□□ 2.41
ATL2-208ENST00000449130 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
ATL2-208ENST00000449130 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
ATL2-208ENST00000449130 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
ATL2-208ENST00000449130 CFTRP13569 1480 aa29.89■■■□□ 2.38
ATL2-208ENST00000449130 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
ATL2-208ENST00000449130 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
ATL2-208ENST00000449130 TOP2AP11388 1531 aaKnown RBP29.65■■■□□ 2.34
ATL2-208ENST00000449130 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
ATL2-208ENST00000449130 RIMBP3CA6NJZ7 1639 aa29.48■■■□□ 2.31
ATL2-208ENST00000449130 RIMBP3BA6NNM3 1639 aa29.48■■■□□ 2.31
ATL2-208ENST00000449130 RIMBP3Q9UFD9 1639 aa29.48■■■□□ 2.31
ATL2-208ENST00000449130 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
ATL2-208ENST00000449130 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
ATL2-208ENST00000449130 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
ATL2-208ENST00000449130 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
ATL2-208ENST00000449130 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
ATL2-208ENST00000449130 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
ATL2-208ENST00000449130 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
ATL2-208ENST00000449130 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.274e-7■■■□□ 18.6
ATL2-208ENST00000449130 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
ATL2-208ENST00000449130 FBLN2P98095 1184 aa29.17■■■□□ 2.26
ATL2-208ENST00000449130 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
ATL2-208ENST00000449130 TRHP20396 242 aaPredicted RBP29.13■■■□□ 2.25
ATL2-208ENST00000449130 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
ATL2-208ENST00000449130 CHD1O14646 1710 aa29.07■■■□□ 2.24
ATL2-208ENST00000449130 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
ATL2-208ENST00000449130 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
ATL2-208ENST00000449130 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
ATL2-208ENST00000449130 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
ATL2-208ENST00000449130 SOGA1O94964 1423 aa28.96■■■□□ 2.23
ATL2-208ENST00000449130 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
ATL2-208ENST00000449130 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
ATL2-208ENST00000449130 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
ATL2-208ENST00000449130 CLASP1Q7Z460 1538 aa28.75■■■□□ 2.19
ATL2-208ENST00000449130 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.18
ATL2-208ENST00000449130 CUX1P39880 1505 aa28.69■■■□□ 2.18
ATL2-208ENST00000449130 GRIN2BQ13224 1484 aa28.69■■■□□ 2.18
ATL2-208ENST00000449130 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
ATL2-208ENST00000449130 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
ATL2-208ENST00000449130 SYNJ2O15056 1496 aa28.64■■■□□ 2.17
ATL2-208ENST00000449130 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
ATL2-208ENST00000449130 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
ATL2-208ENST00000449130 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
ATL2-208ENST00000449130 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
ATL2-208ENST00000449130 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
ATL2-208ENST00000449130 ERCC6L2Q5T890 1561 aa28.35■■■□□ 2.13
ATL2-208ENST00000449130 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
ATL2-208ENST00000449130 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
ATL2-208ENST00000449130 NUP160Q12769 1436 aa28.24■■■□□ 2.11
ATL2-208ENST00000449130 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
ATL2-208ENST00000449130 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
ATL2-208ENST00000449130 ADAMTS12P58397 1594 aa28.17■■■□□ 2.1
ATL2-208ENST00000449130 FHAD1B1AJZ9 1412 aa28.16■■■□□ 2.1
ATL2-208ENST00000449130 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
ATL2-208ENST00000449130 JPH4Q96JJ6 628 aa28.08■■■□□ 2.09
ATL2-208ENST00000449130 PRG4Q92954 1404 aaPredicted RBP28.06■■■□□ 2.08
ATL2-208ENST00000449130 TOP2BQ02880 1626 aa28.06■■■□□ 2.08
ATL2-208ENST00000449130 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
ATL2-208ENST00000449130 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
ATL2-208ENST00000449130 KIF13AQ9H1H9 1805 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms