RNA–Protein interactions for RNA: ENST00000416222.1

ATL2-205, Transcript of atlastin GTPase 2, humanhuman

TSL 4

Gene ATL2, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-205ENST00000416222 NISCHQ9Y2I1 1504 aa40.71■■■■■ 4.11
ATL2-205ENST00000416222 CCDC180Q9P1Z9 1646 aa36.6■■■■□ 3.45
ATL2-205ENST00000416222 ABCC9O60706 1549 aa36.03■■■■□ 3.36
ATL2-205ENST00000416222 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
ATL2-205ENST00000416222 NACADO15069 1562 aa34.4■■■■□ 3.1
ATL2-205ENST00000416222 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
ATL2-205ENST00000416222 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
ATL2-205ENST00000416222 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
ATL2-205ENST00000416222 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
ATL2-205ENST00000416222 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
ATL2-205ENST00000416222 BICRAQ9NZM4 1560 aa33.52■■■□□ 2.96
ATL2-205ENST00000416222 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
ATL2-205ENST00000416222 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
ATL2-205ENST00000416222 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
ATL2-205ENST00000416222 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
ATL2-205ENST00000416222 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
ATL2-205ENST00000416222 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
ATL2-205ENST00000416222 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
ATL2-205ENST00000416222 SMARCA4P51532 1647 aa31.77■■■□□ 2.68
ATL2-205ENST00000416222 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
ATL2-205ENST00000416222 SMARCA2P51531 1590 aa31.64■■■□□ 2.65
ATL2-205ENST00000416222 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.65
ATL2-205ENST00000416222 ATAD2BQ9ULI0 1458 aa31.61■■■□□ 2.65
ATL2-205ENST00000416222 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
ATL2-205ENST00000416222 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
ATL2-205ENST00000416222 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
ATL2-205ENST00000416222 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
ATL2-205ENST00000416222 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
ATL2-205ENST00000416222 WIZO95785 1651 aa31.06■■■□□ 2.56
ATL2-205ENST00000416222 NESP48681 1621 aa31.05■■■□□ 2.56
ATL2-205ENST00000416222 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
ATL2-205ENST00000416222 CUX2O14529 1486 aa31.01■■■□□ 2.55
ATL2-205ENST00000416222 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
ATL2-205ENST00000416222 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
ATL2-205ENST00000416222 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.51
ATL2-205ENST00000416222 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
ATL2-205ENST00000416222 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
ATL2-205ENST00000416222 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
ATL2-205ENST00000416222 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
ATL2-205ENST00000416222 MRC2Q9UBG0 1479 aa30.47■■■□□ 2.47
ATL2-205ENST00000416222 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
ATL2-205ENST00000416222 CFTRP13569 1480 aa30.44■■■□□ 2.46
ATL2-205ENST00000416222 WDR62O43379 1518 aa30.43■■■□□ 2.46
ATL2-205ENST00000416222 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
ATL2-205ENST00000416222 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
ATL2-205ENST00000416222 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
ATL2-205ENST00000416222 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
ATL2-205ENST00000416222 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
ATL2-205ENST00000416222 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
ATL2-205ENST00000416222 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
ATL2-205ENST00000416222 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
ATL2-205ENST00000416222 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
ATL2-205ENST00000416222 ZNF608Q9ULD9 1512 aaPredicted RBP29.65■■■□□ 2.34
ATL2-205ENST00000416222 TARBP1Q13395 1621 aaKnown RBP29.63■■■□□ 2.33
ATL2-205ENST00000416222 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
ATL2-205ENST00000416222 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
ATL2-205ENST00000416222 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
ATL2-205ENST00000416222 CUX1P39880 1505 aa29.45■■■□□ 2.31
ATL2-205ENST00000416222 CHD1O14646 1710 aa29.45■■■□□ 2.3
ATL2-205ENST00000416222 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
ATL2-205ENST00000416222 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
ATL2-205ENST00000416222 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
ATL2-205ENST00000416222 AQRO60306 1485 aaKnown RBP eCLIP29.38■■■□□ 2.294e-6■■□□□ 14.1
ATL2-205ENST00000416222 SOGA1O94964 1423 aa29.37■■■□□ 2.29
ATL2-205ENST00000416222 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
ATL2-205ENST00000416222 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
ATL2-205ENST00000416222 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
ATL2-205ENST00000416222 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
ATL2-205ENST00000416222 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
ATL2-205ENST00000416222 TDRD9Q8NDG6 1382 aaKnown RBP29.23■■■□□ 2.27
ATL2-205ENST00000416222 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
ATL2-205ENST00000416222 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
ATL2-205ENST00000416222 MAGI1Q96QZ7 1491 aaPredicted RBP29.16■■■□□ 2.26
ATL2-205ENST00000416222 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
ATL2-205ENST00000416222 ABCA5Q8WWZ7 1642 aa29.15■■■□□ 2.26
ATL2-205ENST00000416222 TOP2BQ02880 1626 aa29.14■■■□□ 2.26
ATL2-205ENST00000416222 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
ATL2-205ENST00000416222 ABCA10Q8WWZ4 1543 aa29.13■■■□□ 2.25
ATL2-205ENST00000416222 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
ATL2-205ENST00000416222 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
ATL2-205ENST00000416222 FBLN2P98095 1184 aa29.06■■■□□ 2.24
ATL2-205ENST00000416222 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
ATL2-205ENST00000416222 SYNJ2O15056 1496 aa29.02■■■□□ 2.24
ATL2-205ENST00000416222 CLASP1Q7Z460 1538 aa29■■■□□ 2.23
ATL2-205ENST00000416222 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
ATL2-205ENST00000416222 ADAMTS12P58397 1594 aa28.89■■■□□ 2.22
ATL2-205ENST00000416222 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
ATL2-205ENST00000416222 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
ATL2-205ENST00000416222 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
ATL2-205ENST00000416222 CYB5RLQ6IPT4 315 aa28.74■■■□□ 2.19
ATL2-205ENST00000416222 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
ATL2-205ENST00000416222 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
ATL2-205ENST00000416222 NUP160Q12769 1436 aa28.66■■■□□ 2.18
ATL2-205ENST00000416222 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
ATL2-205ENST00000416222 CUL7Q14999 1698 aa28.54■■■□□ 2.16
ATL2-205ENST00000416222 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
ATL2-205ENST00000416222 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
ATL2-205ENST00000416222 KIF27Q86VH2 1401 aa28.48■■■□□ 2.15
ATL2-205ENST00000416222 IGF1RP08069 1367 aa28.35■■■□□ 2.13
ATL2-205ENST00000416222 TRHP20396 242 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms