RNA–Protein interactions for RNA: ENST00000511561.1

LIFR-208, Transcript of LIF receptor alpha, humanhuman

TSL 4

Gene LIFR, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-208ENST00000511561 NISCHQ9Y2I1 1504 aa47.36■■■■■ 5.17
LIFR-208ENST00000511561 CCDC180Q9P1Z9 1646 aa42.15■■■■■ 4.34
LIFR-208ENST00000511561 ABCC9O60706 1549 aa40.81■■■■■ 4.12
LIFR-208ENST00000511561 NACADO15069 1562 aa39.54■■■■□ 3.92
LIFR-208ENST00000511561 ZCCHC6Q5VYS8 1495 aaKnown RBP39.52■■■■□ 3.92
LIFR-208ENST00000511561 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
LIFR-208ENST00000511561 MYO15BQ96JP2 1530 aa39.47■■■■□ 3.91
LIFR-208ENST00000511561 DCAF1Q9Y4B6 1507 aa39.34■■■■□ 3.89
LIFR-208ENST00000511561 DCAF8L2P0C7V8 631 aa39.17■■■■□ 3.86
LIFR-208ENST00000511561 UNC13AQ9UPW8 1703 aa38.63■■■■□ 3.78
LIFR-208ENST00000511561 BICRAQ9NZM4 1560 aa38.29■■■■□ 3.72
LIFR-208ENST00000511561 SCRIBQ14160 1630 aa38.26■■■■□ 3.71
LIFR-208ENST00000511561 PABPN1Q86U42 306 aaKnown RBP eCLIP38.07■■■■□ 3.68
LIFR-208ENST00000511561 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
LIFR-208ENST00000511561 DNAJC5BQ9UF47 199 aa37.26■■■■□ 3.56
LIFR-208ENST00000511561 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
LIFR-208ENST00000511561 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
LIFR-208ENST00000511561 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
LIFR-208ENST00000511561 SMARCA4P51532 1647 aa36.72■■■■□ 3.47
LIFR-208ENST00000511561 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
LIFR-208ENST00000511561 SMARCA2P51531 1590 aa36.47■■■■□ 3.43
LIFR-208ENST00000511561 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
LIFR-208ENST00000511561 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
LIFR-208ENST00000511561 ATAD2BQ9ULI0 1458 aa36.45■■■■□ 3.43
LIFR-208ENST00000511561 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
LIFR-208ENST00000511561 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
LIFR-208ENST00000511561 BAZ1BQ9UIG0 1483 aaKnown RBP36.13■■■■□ 3.37
LIFR-208ENST00000511561 RSF1Q96T23 1441 aaPredicted RBP36.11■■■■□ 3.37
LIFR-208ENST00000511561 WIZO95785 1651 aa36.06■■■■□ 3.36
LIFR-208ENST00000511561 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
LIFR-208ENST00000511561 LAMC3Q9Y6N6 1575 aa35.48■■■■□ 3.27
LIFR-208ENST00000511561 NESP48681 1621 aa35.38■■■■□ 3.25
LIFR-208ENST00000511561 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
LIFR-208ENST00000511561 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
LIFR-208ENST00000511561 CFTRP13569 1480 aa35.22■■■■□ 3.23
LIFR-208ENST00000511561 ERCC6Q03468 1493 aa35.17■■■■□ 3.22
LIFR-208ENST00000511561 PDS5BQ9NTI5 1447 aa35.17■■■■□ 3.22
LIFR-208ENST00000511561 SUPT5HO00267 1087 aaKnown RBP35.09■■■■□ 3.21
LIFR-208ENST00000511561 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
LIFR-208ENST00000511561 KIF21AQ7Z4S6 1674 aa35.06■■■■□ 3.2
LIFR-208ENST00000511561 THOC2Q8NI27 1593 aaKnown RBP34.94■■■■□ 3.18
LIFR-208ENST00000511561 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
LIFR-208ENST00000511561 CUX2O14529 1486 aa34.89■■■■□ 3.18
LIFR-208ENST00000511561 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
LIFR-208ENST00000511561 MRC2Q9UBG0 1479 aa34.8■■■■□ 3.16
LIFR-208ENST00000511561 WDR62O43379 1518 aa34.73■■■■□ 3.15
LIFR-208ENST00000511561 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
LIFR-208ENST00000511561 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
LIFR-208ENST00000511561 DNMBPQ6XZF7 1577 aa34.41■■■■□ 3.1
LIFR-208ENST00000511561 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
LIFR-208ENST00000511561 CUX1P39880 1505 aa34.2■■■■□ 3.06
LIFR-208ENST00000511561 IFT140Q96RY7 1462 aa34.16■■■■□ 3.06
LIFR-208ENST00000511561 POLA1P09884 1462 aaPredicted RBP34.12■■■■□ 3.05
LIFR-208ENST00000511561 TARBP1Q13395 1621 aaKnown RBP34.07■■■■□ 3.04
LIFR-208ENST00000511561 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
LIFR-208ENST00000511561 BIVM-ERCC5R4GMW8 1640 aa34.03■■■■□ 3.04
LIFR-208ENST00000511561 WRNQ14191 1432 aaPredicted RBP eCLIP34.03■■■■□ 3.04
LIFR-208ENST00000511561 TOP2BQ02880 1626 aa34.01■■■■□ 3.04
LIFR-208ENST00000511561 SYNJ1O43426 1573 aa33.94■■■■□ 3.02
LIFR-208ENST00000511561 SOGA1O94964 1423 aa33.94■■■■□ 3.02
LIFR-208ENST00000511561 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
LIFR-208ENST00000511561 ZNF608Q9ULD9 1512 aaPredicted RBP33.9■■■■□ 3.02
LIFR-208ENST00000511561 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
LIFR-208ENST00000511561 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
LIFR-208ENST00000511561 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
LIFR-208ENST00000511561 AQRO60306 1485 aaKnown RBP eCLIP33.72■■■□□ 2.99
LIFR-208ENST00000511561 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
LIFR-208ENST00000511561 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
LIFR-208ENST00000511561 GAPVD1Q14C86 1478 aa33.58■■■□□ 2.97
LIFR-208ENST00000511561 GRIN2BQ13224 1484 aa33.57■■■□□ 2.97
LIFR-208ENST00000511561 PBRM1Q86U86 1689 aa33.55■■■□□ 2.96
LIFR-208ENST00000511561 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
LIFR-208ENST00000511561 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
LIFR-208ENST00000511561 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
LIFR-208ENST00000511561 ERICH3Q5RHP9 1530 aa33.41■■■□□ 2.94
LIFR-208ENST00000511561 CHD1O14646 1710 aa33.39■■■□□ 2.94
LIFR-208ENST00000511561 OSCARQ8IYS5 282 aa33.35■■■□□ 2.93
LIFR-208ENST00000511561 SYNJ2O15056 1496 aa33.35■■■□□ 2.93
LIFR-208ENST00000511561 KIF27Q86VH2 1401 aa33.32■■■□□ 2.92
LIFR-208ENST00000511561 ADAMTS12P58397 1594 aa33.29■■■□□ 2.92
LIFR-208ENST00000511561 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
LIFR-208ENST00000511561 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
LIFR-208ENST00000511561 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
LIFR-208ENST00000511561 IGF1RP08069 1367 aa33.15■■■□□ 2.9
LIFR-208ENST00000511561 FBLN2P98095 1184 aa33.15■■■□□ 2.9
LIFR-208ENST00000511561 CUL7Q14999 1698 aa33.15■■■□□ 2.9
LIFR-208ENST00000511561 GRIN2AQ12879 1464 aa33.14■■■□□ 2.9
LIFR-208ENST00000511561 CLASP1Q7Z460 1538 aa33.08■■■□□ 2.89
LIFR-208ENST00000511561 NUP160Q12769 1436 aa33.02■■■□□ 2.88
LIFR-208ENST00000511561 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
LIFR-208ENST00000511561 CHIC1Q5VXU3 224 aa32.97■■■□□ 2.87
LIFR-208ENST00000511561 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
LIFR-208ENST00000511561 CARMIL1Q5VZK9 1371 aa32.93■■■□□ 2.86
LIFR-208ENST00000511561 EEA1Q15075 1411 aa32.87■■■□□ 2.85
LIFR-208ENST00000511561 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
LIFR-208ENST00000511561 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
LIFR-208ENST00000511561 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
LIFR-208ENST00000511561 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
LIFR-208ENST00000511561 SHROOM2Q13796 1616 aa32.8■■■□□ 2.84
LIFR-208ENST00000511561 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms