Protein–RNA interactions for Protein: Q9NZP8

C1RL, Complement C1r subcomponent-like protein, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RLQ9NZP8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1RLQ9NZP8 WASH5P-204ENST00000632292 975 ntBASIC21.71■■□□□ 1.07
C1RLQ9NZP8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.71■■□□□ 1.07
C1RLQ9NZP8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1RLQ9NZP8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
C1RLQ9NZP8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C1RLQ9NZP8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C1RLQ9NZP8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C1RLQ9NZP8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
C1RLQ9NZP8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C1RLQ9NZP8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1RLQ9NZP8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1RLQ9NZP8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.65■■□□□ 1.06
C1RLQ9NZP8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C1RLQ9NZP8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C1RLQ9NZP8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.63■■□□□ 1.05
C1RLQ9NZP8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C1RLQ9NZP8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1RLQ9NZP8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1RLQ9NZP8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.61■■□□□ 1.05
C1RLQ9NZP8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
C1RLQ9NZP8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
C1RLQ9NZP8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C1RLQ9NZP8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C1RLQ9NZP8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.6■■□□□ 1.05
C1RLQ9NZP8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.59■■□□□ 1.05
C1RLQ9NZP8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
C1RLQ9NZP8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1RLQ9NZP8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
C1RLQ9NZP8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C1RLQ9NZP8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.58■■□□□ 1.05
C1RLQ9NZP8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
C1RLQ9NZP8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1RLQ9NZP8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
C1RLQ9NZP8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C1RLQ9NZP8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1RLQ9NZP8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1RLQ9NZP8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.54■■□□□ 1.04
C1RLQ9NZP8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C1RLQ9NZP8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
C1RLQ9NZP8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
C1RLQ9NZP8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
C1RLQ9NZP8 ZNRF2P2-203ENST00000454624 420 ntBASIC21.51■■□□□ 1.03
C1RLQ9NZP8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
C1RLQ9NZP8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
C1RLQ9NZP8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
C1RLQ9NZP8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
C1RLQ9NZP8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
C1RLQ9NZP8 HLA-V-202ENST00000446817 847 ntBASIC21.49■■□□□ 1.03
C1RLQ9NZP8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.49■■□□□ 1.03
C1RLQ9NZP8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
C1RLQ9NZP8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
C1RLQ9NZP8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
C1RLQ9NZP8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C1RLQ9NZP8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.48■■□□□ 1.03
C1RLQ9NZP8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C1RLQ9NZP8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
C1RLQ9NZP8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.47■■□□□ 1.03
C1RLQ9NZP8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C1RLQ9NZP8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.46■■□□□ 1.03
C1RLQ9NZP8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.46■■□□□ 1.03
C1RLQ9NZP8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C1RLQ9NZP8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.45■■□□□ 1.02
C1RLQ9NZP8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
C1RLQ9NZP8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C1RLQ9NZP8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.44■■□□□ 1.02
C1RLQ9NZP8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
C1RLQ9NZP8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
C1RLQ9NZP8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
C1RLQ9NZP8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
C1RLQ9NZP8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.42■■□□□ 1.02
C1RLQ9NZP8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.42■■□□□ 1.02
C1RLQ9NZP8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
C1RLQ9NZP8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.41■■□□□ 1.02
C1RLQ9NZP8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 DUX4L29-201ENST00000425409 679 ntBASIC21.4■■□□□ 1.02
C1RLQ9NZP8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C1RLQ9NZP8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.39■■□□□ 1.02
C1RLQ9NZP8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C1RLQ9NZP8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.39■■□□□ 1.01
C1RLQ9NZP8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1RLQ9NZP8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1RLQ9NZP8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.37■■□□□ 1.01
C1RLQ9NZP8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 1068.9 ms