Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE5Q9HCH3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE5Q9HCH3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.65■■□□□ 1.7
CPNE5Q9HCH3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPNE5Q9HCH3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.65■■□□□ 1.7
CPNE5Q9HCH3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.64■■□□□ 1.69
CPNE5Q9HCH3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CPNE5Q9HCH3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPNE5Q9HCH3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.62■■□□□ 1.69
CPNE5Q9HCH3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.62■■□□□ 1.69
CPNE5Q9HCH3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE5Q9HCH3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.61■■□□□ 1.69
CPNE5Q9HCH3 AC021231.2-201ENST00000594613 730 ntBASIC25.61■■□□□ 1.69
CPNE5Q9HCH3 HSD17B1P1-201ENST00000590052 955 ntBASIC25.6■■□□□ 1.69
CPNE5Q9HCH3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.6■■□□□ 1.69
CPNE5Q9HCH3 WASH5P-204ENST00000632292 975 ntBASIC25.6■■□□□ 1.69
CPNE5Q9HCH3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CPNE5Q9HCH3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CPNE5Q9HCH3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE5Q9HCH3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE5Q9HCH3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE5Q9HCH3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE5Q9HCH3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.58■■□□□ 1.69
CPNE5Q9HCH3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE5Q9HCH3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE5Q9HCH3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPNE5Q9HCH3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPNE5Q9HCH3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CPNE5Q9HCH3 AC016575.1-201ENST00000607026 382 ntBASIC25.57■■□□□ 1.68
CPNE5Q9HCH3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CPNE5Q9HCH3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE5Q9HCH3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE5Q9HCH3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.56■■□□□ 1.68
CPNE5Q9HCH3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CPNE5Q9HCH3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.55■■□□□ 1.68
CPNE5Q9HCH3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.55■■□□□ 1.68
CPNE5Q9HCH3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPNE5Q9HCH3 MIR3648-2-201ENST00000581792 180 ntBASIC25.53■■□□□ 1.68
CPNE5Q9HCH3 MIR3648-1-201ENST00000615959 180 ntBASIC25.53■■□□□ 1.68
CPNE5Q9HCH3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE5Q9HCH3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.52■■□□□ 1.68
CPNE5Q9HCH3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.52■■□□□ 1.68
CPNE5Q9HCH3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.51■■□□□ 1.67
CPNE5Q9HCH3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.51■■□□□ 1.67
CPNE5Q9HCH3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.5■■□□□ 1.67
CPNE5Q9HCH3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.5■■□□□ 1.67
CPNE5Q9HCH3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE5Q9HCH3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.49■■□□□ 1.67
CPNE5Q9HCH3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE5Q9HCH3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CPNE5Q9HCH3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE5Q9HCH3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE5Q9HCH3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CPNE5Q9HCH3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE5Q9HCH3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.47■■□□□ 1.67
CPNE5Q9HCH3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE5Q9HCH3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE5Q9HCH3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE5Q9HCH3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE5Q9HCH3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CPNE5Q9HCH3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
CPNE5Q9HCH3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CPNE5Q9HCH3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE5Q9HCH3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.43■■□□□ 1.66
CPNE5Q9HCH3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE5Q9HCH3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE5Q9HCH3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE5Q9HCH3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE5Q9HCH3 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.39■■□□□ 1.66
CPNE5Q9HCH3 CR559946.2-201ENST00000623684 991 ntBASIC25.39■■□□□ 1.66
CPNE5Q9HCH3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CPNE5Q9HCH3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CPNE5Q9HCH3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.38■■□□□ 1.65
CPNE5Q9HCH3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CPNE5Q9HCH3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.37■■□□□ 1.65
CPNE5Q9HCH3 DUX4L11-201ENST00000611504 1267 ntBASIC25.37■■□□□ 1.65
CPNE5Q9HCH3 DUX4L12-201ENST00000614593 1267 ntBASIC25.37■■□□□ 1.65
CPNE5Q9HCH3 DUX4L14-201ENST00000621227 1267 ntBASIC25.37■■□□□ 1.65
CPNE5Q9HCH3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CPNE5Q9HCH3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 MIR6090-201ENST00000622481 60 ntBASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE5Q9HCH3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CPNE5Q9HCH3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CPNE5Q9HCH3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPNE5Q9HCH3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.34■■□□□ 1.65
CPNE5Q9HCH3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.34■■□□□ 1.65
CPNE5Q9HCH3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.33■■□□□ 1.65
CPNE5Q9HCH3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE5Q9HCH3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE5Q9HCH3 AC108673.1-201ENST00000510422 1159 ntBASIC25.32■■□□□ 1.64
CPNE5Q9HCH3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CPNE5Q9HCH3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.32■■□□□ 1.64
CPNE5Q9HCH3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CPNE5Q9HCH3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE5Q9HCH3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE5Q9HCH3 LINC01971-201ENST00000617888 1048 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms