Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF2Q99496 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF2Q99496 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF2Q99496 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNF2Q99496 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF2Q99496 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF2Q99496 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF2Q99496 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF2Q99496 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF2Q99496 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF2Q99496 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF2Q99496 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF2Q99496 ST7-AS1-201ENST00000456775 1889 ntBASIC20.92■□□□□ 0.94
RNF2Q99496 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
RNF2Q99496 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF2Q99496 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF2Q99496 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF2Q99496 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF2Q99496 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF2Q99496 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF2Q99496 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF2Q99496 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF2Q99496 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF2Q99496 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF2Q99496 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF2Q99496 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF2Q99496 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF2Q99496 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF2Q99496 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF2Q99496 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF2Q99496 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF2Q99496 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF2Q99496 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF2Q99496 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF2Q99496 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF2Q99496 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF2Q99496 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF2Q99496 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF2Q99496 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF2Q99496 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF2Q99496 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF2Q99496 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF2Q99496 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF2Q99496 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF2Q99496 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF2Q99496 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF2Q99496 RARRES2P7-201ENST00000567349 469 ntBASIC20.75■□□□□ 0.91
RNF2Q99496 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF2Q99496 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF2Q99496 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF2Q99496 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RNF2Q99496 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF2Q99496 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF2Q99496 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF2Q99496 AC142086.6-201ENST00000621154 1765 ntBASIC20.72■□□□□ 0.91
RNF2Q99496 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF2Q99496 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF2Q99496 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 AL135925.1-201ENST00000605920 1701 ntBASIC20.7■□□□□ 0.9
RNF2Q99496 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF2Q99496 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
RNF2Q99496 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF2Q99496 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF2Q99496 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF2Q99496 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF2Q99496 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF2Q99496 SETD8P1-201ENST00000623146 1180 ntBASIC20.65■□□□□ 0.9
RNF2Q99496 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF2Q99496 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF2Q99496 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF2Q99496 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF2Q99496 AL133380.1-201ENST00000506013 324 ntBASIC20.64■□□□□ 0.89
RNF2Q99496 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms