Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SGMS2Q8NHU3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SGMS2Q8NHU3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SGMS2Q8NHU3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.76■■□□□ 1.07
SGMS2Q8NHU3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SGMS2Q8NHU3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.76■■□□□ 1.07
SGMS2Q8NHU3 AC005559.1-201ENST00000589661 871 ntBASIC21.75■■□□□ 1.07
SGMS2Q8NHU3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SGMS2Q8NHU3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.73■■□□□ 1.07
SGMS2Q8NHU3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SGMS2Q8NHU3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SGMS2Q8NHU3 MIR762-201ENST00000390236 83 ntBASIC21.71■■□□□ 1.07
SGMS2Q8NHU3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.71■■□□□ 1.07
SGMS2Q8NHU3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SGMS2Q8NHU3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGMS2Q8NHU3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGMS2Q8NHU3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SGMS2Q8NHU3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SGMS2Q8NHU3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SGMS2Q8NHU3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SGMS2Q8NHU3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGMS2Q8NHU3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGMS2Q8NHU3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGMS2Q8NHU3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGMS2Q8NHU3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.68■■□□□ 1.06
SGMS2Q8NHU3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGMS2Q8NHU3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SGMS2Q8NHU3 MIR4449-201ENST00000578365 66 ntBASIC21.67■■□□□ 1.06
SGMS2Q8NHU3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGMS2Q8NHU3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
SGMS2Q8NHU3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.66■■□□□ 1.06
SGMS2Q8NHU3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SGMS2Q8NHU3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SGMS2Q8NHU3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SGMS2Q8NHU3 AL161658.1-201ENST00000623641 1967 ntBASIC21.65■■□□□ 1.06
SGMS2Q8NHU3 AC120057.4-201ENST00000624722 1615 ntBASIC21.63■■□□□ 1.05
SGMS2Q8NHU3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SGMS2Q8NHU3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGMS2Q8NHU3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
SGMS2Q8NHU3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SGMS2Q8NHU3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.61■■□□□ 1.05
SGMS2Q8NHU3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SGMS2Q8NHU3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.6■■□□□ 1.05
SGMS2Q8NHU3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SGMS2Q8NHU3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SGMS2Q8NHU3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SGMS2Q8NHU3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SGMS2Q8NHU3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.58■■□□□ 1.05
SGMS2Q8NHU3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.58■■□□□ 1.05
SGMS2Q8NHU3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SGMS2Q8NHU3 MIR639-201ENST00000384974 98 ntBASIC21.56■■□□□ 1.04
SGMS2Q8NHU3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.56■■□□□ 1.04
SGMS2Q8NHU3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGMS2Q8NHU3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SGMS2Q8NHU3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGMS2Q8NHU3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SGMS2Q8NHU3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.54■■□□□ 1.04
SGMS2Q8NHU3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SGMS2Q8NHU3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SGMS2Q8NHU3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SGMS2Q8NHU3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SGMS2Q8NHU3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.51■■□□□ 1.03
SGMS2Q8NHU3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SGMS2Q8NHU3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SGMS2Q8NHU3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGMS2Q8NHU3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SGMS2Q8NHU3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.48■■□□□ 1.03
SGMS2Q8NHU3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.48■■□□□ 1.03
SGMS2Q8NHU3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.48■■□□□ 1.03
SGMS2Q8NHU3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
SGMS2Q8NHU3 DUX4L29-201ENST00000425409 679 ntBASIC21.47■■□□□ 1.03
SGMS2Q8NHU3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.47■■□□□ 1.03
SGMS2Q8NHU3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SGMS2Q8NHU3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SGMS2Q8NHU3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SGMS2Q8NHU3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SGMS2Q8NHU3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SGMS2Q8NHU3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SGMS2Q8NHU3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SGMS2Q8NHU3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SGMS2Q8NHU3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms