Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 EFEMP2-207ENST00000527277 543 ntTSL 237.48■■■■□ 3.594e-8■■■■■ 28.7
PABPN1Q86U42 EFEMP2-219ENST00000532648 408 ntTSL 336.38■■■■□ 3.414e-8■■■■■ 28.7
PABPN1Q86U42 LARP4B-212ENST00000614908 1826 ntTSL 435.57■■■■□ 3.284e-8■■■■■ 28.7
PABPN1Q86U42 EFEMP2-202ENST00000524408 525 ntTSL 532.97■■■□□ 2.874e-8■■■■■ 28.7
PABPN1Q86U42 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.974e-8■■■■■ 28.7
PABPN1Q86U42 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.614e-8■■■■■ 28.7
PABPN1Q86U42 ABCA7-204ENST00000524383 389 ntTSL 341.89■■■■■ 4.31e-7■■■■■ 28.6
PABPN1Q86U42 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.453e-7■■■■■ 28.6
PABPN1Q86U42 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC38.11■■■■□ 3.692e-9■■■■■ 28.5
PABPN1Q86U42 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)34.42■■■■□ 3.13e-7■■■■■ 28.5
PABPN1Q86U42 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC34.42■■■■□ 3.13e-7■■■■■ 28.5
PABPN1Q86U42 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.543e-7■■■■■ 28.5
PABPN1Q86U42 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)30.04■■■□□ 2.43e-7■■■■■ 28.5
PABPN1Q86U42 CPSF1-210ENST00000532935 506 ntTSL 530.71■■■□□ 2.517e-8■■■■■ 28.3
PABPN1Q86U42 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC34.87■■■■□ 3.174e-7■■■■■ 28.3
PABPN1Q86U42 CPSF1-206ENST00000531480 789 ntTSL 328■■■□□ 2.074e-7■■■■■ 28.3
PABPN1Q86U42 RTEL1-TNFRSF6B-204ENST00000496281 5314 ntTSL 225.61■■□□□ 1.692e-7■■■■■ 28.3
PABPN1Q86U42 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.219e-7■■■■■ 28.2
PABPN1Q86U42 ATAD3B-205ENST00000485748 3233 ntTSL 225.24■■□□□ 1.639e-7■■■■■ 28.2
PABPN1Q86U42 ATAD3B-204ENST00000474481 3367 ntTSL 224.06■■□□□ 1.449e-7■■■■■ 28.2
PABPN1Q86U42 ATAD3B-203ENST00000472194 4314 ntTSL 1 (best)19.12■□□□□ 0.659e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC37.22■■■■□ 3.555e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-207ENST00000461550 1478 ntTSL 535.48■■■■□ 3.275e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-208ENST00000469744 1467 ntTSL 1 (best)35.48■■■■□ 3.275e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.15e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-210ENST00000483764 1512 ntTSL 1 (best)31.25■■■□□ 2.595e-7■■■■■ 28.2
PABPN1Q86U42 MRPL28-209ENST00000481453 2229 ntTSL 231.22■■■□□ 2.595e-7■■■■■ 28.2
PABPN1Q86U42 TONSL-202ENST00000497613 6607 ntTSL 222.11■■□□□ 1.139e-7■■■■■ 28.1
PABPN1Q86U42 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.979e-7■■■■■ 28.1
PABPN1Q86U42 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.439e-7■■■■■ 28.1
PABPN1Q86U42 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC20.76■□□□□ 0.919e-7■■■■■ 28.1
PABPN1Q86U42 FANCA-209ENST00000562424 745 ntTSL 223.15■■□□□ 1.32e-7■■■■■ 28
PABPN1Q86U42 PSMC5-219ENST00000584880 597 ntTSL 322.54■■□□□ 1.25e-7■■■■■ 28
PABPN1Q86U42 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC44.98■■■■■ 4.791e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.371e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC19.33■□□□□ 0.681e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC18.75■□□□□ 0.591e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-206ENST00000513048 994 ntTSL 1 (best)17.06■□□□□ 0.321e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-204ENST00000508282 545 ntTSL 316.32■□□□□ 0.21e-6■■■■■ 27.9
PABPN1Q86U42 DHFR-207ENST00000513314 582 ntTSL 315.45■□□□□ 0.061e-6■■■■■ 27.9
PABPN1Q86U42 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC39.99■■■■□ 3.999e-8■■■■■ 27.9
PABPN1Q86U42 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC39.7■■■■□ 3.959e-8■■■■■ 27.9
PABPN1Q86U42 ACAP3-206ENST00000467278 2725 ntTSL 1 (best)26.59■■□□□ 1.852e-7■■■■■ 27.9
PABPN1Q86U42 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC31.45■■■□□ 2.625e-7■■■■■ 27.9
PABPN1Q86U42 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.475e-7■■■■■ 27.9
PABPN1Q86U42 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.095e-7■■■■■ 27.9
PABPN1Q86U42 COL9A2-204ENST00000427563 548 ntTSL 338.95■■■■□ 3.837e-8■■■■■ 27.9
PABPN1Q86U42 DDX56-211ENST00000479602 440 ntTSL 218.41■□□□□ 0.542e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-206ENST00000448973 1710 ntTSL 1 (best)43.95■■■■■ 4.632e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-203ENST00000397664 604 ntTSL 2 BASIC42.7■■■■■ 4.432e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC38.76■■■■□ 3.82e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-211ENST00000568077 588 ntTSL 338.25■■■■□ 3.712e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-207ENST00000564818 1653 ntTSL 1 (best)37.69■■■■□ 3.622e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-206ENST00000563493 1651 ntTSL 536.45■■■■□ 3.432e-7■■■■■ 27.8
PABPN1Q86U42 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.432e-7■■■■■ 27.8
PABPN1Q86U42 SMG9-210ENST00000600097 538 ntTSL 236.27■■■■□ 3.42e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-205ENST00000562058 1876 ntTSL 1 (best)35.43■■■■□ 3.262e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-204ENST00000397665 558 ntTSL 2 BASIC34.1■■■■□ 3.052e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-205ENST00000397666 726 ntTSL 2 BASIC33.94■■■■□ 3.022e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC33.94■■■■□ 3.022e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-207ENST00000456420 755 ntTSL 333.28■■■□□ 2.922e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC33.24■■■□□ 2.912e-7■■■■■ 27.8
PABPN1Q86U42 NEK8-202ENST00000543014 2055 ntTSL 232.63■■■□□ 2.812e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.772e-7■■■■■ 27.8
PABPN1Q86U42 COL16A1-207ENST00000466829 254 ntTSL 332.3■■■□□ 2.762e-7■■■■■ 27.8
PABPN1Q86U42 GALE-207ENST00000459934 1563 ntTSL 531.9■■■□□ 2.72e-7■■■■■ 27.8
PABPN1Q86U42 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.612e-7■■■■■ 27.8
PABPN1Q86U42 METTL26-214ENST00000614890 801 ntTSL 3 BASIC30.17■■■□□ 2.422e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC29.16■■■□□ 2.262e-7■■■■■ 27.8
PABPN1Q86U42 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.062e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.012e-7■■■■■ 27.8
PABPN1Q86U42 QARS-237ENST00000635194 582 ntTSL 527.26■■□□□ 1.952e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-208ENST00000566189 939 ntTSL 527.07■■□□□ 1.922e-7■■■■■ 27.8
PABPN1Q86U42 GALE-206ENST00000456977 672 ntTSL 226.83■■□□□ 1.892e-7■■■■■ 27.8
PABPN1Q86U42 QARS-232ENST00000634609 553 ntTSL 1 (best)26.49■■□□□ 1.832e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.832e-7■■■■■ 27.8
PABPN1Q86U42 PSMC5-207ENST00000580063 562 ntTSL 226.14■■□□□ 1.787e-7■■■■■ 27.8
PABPN1Q86U42 QARS-235ENST00000634953 583 ntTSL 426.09■■□□□ 1.772e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.732e-7■■■■■ 27.8
PABPN1Q86U42 QARS-239ENST00000635278 597 ntTSL 225.86■■□□□ 1.732e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-209ENST00000563969 6949 ntTSL 225.83■■□□□ 1.732e-7■■■■■ 27.8
PABPN1Q86U42 QARS-233ENST00000634724 754 ntTSL 224.33■■□□□ 1.492e-7■■■■■ 27.8
PABPN1Q86U42 QARS-204ENST00000418549 558 ntTSL 424.32■■□□□ 1.482e-7■■■■■ 27.8
PABPN1Q86U42 CENPT-209ENST00000562947 797 ntTSL 324.19■■□□□ 1.462e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-203ENST00000393966 2182 ntTSL 1 (best)23.57■■□□□ 1.362e-7■■■■■ 27.8
PABPN1Q86U42 QARS-243ENST00000635494 568 ntTSL 422.72■■□□□ 1.232e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.162e-7■■■■■ 27.8
PABPN1Q86U42 QARS-238ENST00000635231 578 ntTSL 422■■□□□ 1.112e-7■■■■■ 27.8
PABPN1Q86U42 MCM3AP-204ENST00000467026 2671 ntTSL 1 (best)21.54■■□□□ 1.042e-7■■■■■ 27.8
PABPN1Q86U42 WDR62-205ENST00000587391 5971 ntTSL 1 (best)21.39■■□□□ 1.022e-7■■■■■ 27.8
PABPN1Q86U42 QARS-236ENST00000635052 570 ntTSL 521.21■□□□□ 0.992e-7■■■■■ 27.8
PABPN1Q86U42 QARS-227ENST00000634425 520 ntTSL 520.8■□□□□ 0.922e-7■■■■■ 27.8
PABPN1Q86U42 SULT1A1-210ENST00000567998 7948 ntTSL 220.71■□□□□ 0.912e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.82e-7■■■■■ 27.8
PABPN1Q86U42 QARS-203ENST00000417025 572 ntTSL 520.04■□□□□ 0.82e-7■■■■■ 27.8
PABPN1Q86U42 MESD-205ENST00000560244 981 ntTSL 520■□□□□ 0.792e-7■■■■■ 27.8
PABPN1Q86U42 QARS-215ENST00000479495 577 ntTSL 419.84■□□□□ 0.772e-7■■■■■ 27.8
PABPN1Q86U42 APMAP-202ENST00000451442 2117 ntTSL 519.81■□□□□ 0.762e-7■■■■■ 27.8
PABPN1Q86U42 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.712e-7■■■■■ 27.8
PABPN1Q86U42 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.72e-7■■■■■ 27.8
Retrieved 100 of 8,254 protein–RNA pairs in 343.4 ms