RNA–Protein interactions for RNA: ENST00000393966.1

PLEKHG4-203, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 1 (best)

Gene PLEKHG4, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-203ENST00000393966 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
PLEKHG4-203ENST00000393966 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
PLEKHG4-203ENST00000393966 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
PLEKHG4-203ENST00000393966 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
PLEKHG4-203ENST00000393966 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
PLEKHG4-203ENST00000393966 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
PLEKHG4-203ENST00000393966 ABCC9O60706 1549 aa24.89■■□□□ 1.58
PLEKHG4-203ENST00000393966 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
PLEKHG4-203ENST00000393966 NACADO15069 1562 aa24.56■■□□□ 1.52
PLEKHG4-203ENST00000393966 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
PLEKHG4-203ENST00000393966 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
PLEKHG4-203ENST00000393966 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
PLEKHG4-203ENST00000393966 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.42
PLEKHG4-203ENST00000393966 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
PLEKHG4-203ENST00000393966 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
PLEKHG4-203ENST00000393966 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
PLEKHG4-203ENST00000393966 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
PLEKHG4-203ENST00000393966 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.362e-7■■■■■ 27.8
PLEKHG4-203ENST00000393966 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
PLEKHG4-203ENST00000393966 WIZO95785 1651 aa23.47■■□□□ 1.35
PLEKHG4-203ENST00000393966 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
PLEKHG4-203ENST00000393966 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
PLEKHG4-203ENST00000393966 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
PLEKHG4-203ENST00000393966 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
PLEKHG4-203ENST00000393966 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
PLEKHG4-203ENST00000393966 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
PLEKHG4-203ENST00000393966 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
PLEKHG4-203ENST00000393966 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
PLEKHG4-203ENST00000393966 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
PLEKHG4-203ENST00000393966 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
PLEKHG4-203ENST00000393966 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
PLEKHG4-203ENST00000393966 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
PLEKHG4-203ENST00000393966 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
PLEKHG4-203ENST00000393966 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
PLEKHG4-203ENST00000393966 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
PLEKHG4-203ENST00000393966 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
PLEKHG4-203ENST00000393966 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
PLEKHG4-203ENST00000393966 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
PLEKHG4-203ENST00000393966 CFTRP13569 1480 aa22.29■■□□□ 1.16
PLEKHG4-203ENST00000393966 SOGA1O94964 1423 aa22.26■■□□□ 1.15
PLEKHG4-203ENST00000393966 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
PLEKHG4-203ENST00000393966 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
PLEKHG4-203ENST00000393966 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
PLEKHG4-203ENST00000393966 TOP2BQ02880 1626 aa22.16■■□□□ 1.14
PLEKHG4-203ENST00000393966 EEA1Q15075 1411 aa22.13■■□□□ 1.13
PLEKHG4-203ENST00000393966 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
PLEKHG4-203ENST00000393966 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
PLEKHG4-203ENST00000393966 CUX1P39880 1505 aa22.08■■□□□ 1.13
PLEKHG4-203ENST00000393966 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
PLEKHG4-203ENST00000393966 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
PLEKHG4-203ENST00000393966 NESP48681 1621 aa21.96■■□□□ 1.11
PLEKHG4-203ENST00000393966 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
PLEKHG4-203ENST00000393966 GOLGA3Q08378 1498 aa21.89■■□□□ 1.09
PLEKHG4-203ENST00000393966 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
PLEKHG4-203ENST00000393966 KIF21BO75037 1637 aa21.87■■□□□ 1.09
PLEKHG4-203ENST00000393966 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
PLEKHG4-203ENST00000393966 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
PLEKHG4-203ENST00000393966 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
PLEKHG4-203ENST00000393966 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
PLEKHG4-203ENST00000393966 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
PLEKHG4-203ENST00000393966 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
PLEKHG4-203ENST00000393966 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
PLEKHG4-203ENST00000393966 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
PLEKHG4-203ENST00000393966 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
PLEKHG4-203ENST00000393966 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
PLEKHG4-203ENST00000393966 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
PLEKHG4-203ENST00000393966 HRCP23327 699 aa21.7■■□□□ 1.06
PLEKHG4-203ENST00000393966 CUX2O14529 1486 aa21.7■■□□□ 1.06
PLEKHG4-203ENST00000393966 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
PLEKHG4-203ENST00000393966 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
PLEKHG4-203ENST00000393966 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
PLEKHG4-203ENST00000393966 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
PLEKHG4-203ENST00000393966 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
PLEKHG4-203ENST00000393966 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
PLEKHG4-203ENST00000393966 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
PLEKHG4-203ENST00000393966 IGF1RP08069 1367 aa21.6■■□□□ 1.05
PLEKHG4-203ENST00000393966 CLIP1P30622 1438 aa21.58■■□□□ 1.04
PLEKHG4-203ENST00000393966 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
PLEKHG4-203ENST00000393966 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
PLEKHG4-203ENST00000393966 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
PLEKHG4-203ENST00000393966 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
PLEKHG4-203ENST00000393966 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
PLEKHG4-203ENST00000393966 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
PLEKHG4-203ENST00000393966 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
PLEKHG4-203ENST00000393966 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
PLEKHG4-203ENST00000393966 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
PLEKHG4-203ENST00000393966 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
PLEKHG4-203ENST00000393966 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
PLEKHG4-203ENST00000393966 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1.01
PLEKHG4-203ENST00000393966 CUL7Q14999 1698 aa21.33■■□□□ 1.01
PLEKHG4-203ENST00000393966 GAPVD1Q14C86 1478 aa21.33■■□□□ 1
PLEKHG4-203ENST00000393966 WDR62O43379 1518 aa21.31■■□□□ 1
PLEKHG4-203ENST00000393966 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
PLEKHG4-203ENST00000393966 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
PLEKHG4-203ENST00000393966 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.99
PLEKHG4-203ENST00000393966 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
PLEKHG4-203ENST00000393966 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
PLEKHG4-203ENST00000393966 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
PLEKHG4-203ENST00000393966 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
PLEKHG4-203ENST00000393966 APLP2Q06481 763 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms