RNA–Protein interactions for RNA: ENST00000524383.1

ABCA7-204, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-204ENST00000524383 NISCHQ9Y2I1 1504 aa49.56■■■■■ 5.52
ABCA7-204ENST00000524383 ABCC9O60706 1549 aa44.99■■■■■ 4.79
ABCA7-204ENST00000524383 CCDC180Q9P1Z9 1646 aa44.57■■■■■ 4.73
ABCA7-204ENST00000524383 RB1CC1Q8TDY2 1594 aa42.65■■■■■ 4.42
ABCA7-204ENST00000524383 DNAJC5BQ9UF47 199 aa42.49■■■■■ 4.39
ABCA7-204ENST00000524383 NACADO15069 1562 aa42.26■■■■■ 4.36
ABCA7-204ENST00000524383 DCAF8L2P0C7V8 631 aa42.19■■■■■ 4.34
ABCA7-204ENST00000524383 PABPN1Q86U42 306 aaKnown RBP eCLIP41.89■■■■■ 4.31e-7■■■■■ 28.6
ABCA7-204ENST00000524383 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
ABCA7-204ENST00000524383 MYO15BQ96JP2 1530 aa41.52■■■■■ 4.24
ABCA7-204ENST00000524383 BICRAQ9NZM4 1560 aa41.36■■■■■ 4.21
ABCA7-204ENST00000524383 ZCCHC6Q5VYS8 1495 aaKnown RBP41.09■■■■■ 4.17
ABCA7-204ENST00000524383 DCAF1Q9Y4B6 1507 aa40.88■■■■■ 4.13
ABCA7-204ENST00000524383 SHROOM4Q9ULL8 1493 aa40.76■■■■■ 4.12
ABCA7-204ENST00000524383 SCRIBQ14160 1630 aa40.66■■■■■ 4.1
ABCA7-204ENST00000524383 CC2D2AQ9P2K1 1620 aa40.58■■■■■ 4.09
ABCA7-204ENST00000524383 CECR2Q9BXF3 1484 aa40.55■■■■■ 4.08
ABCA7-204ENST00000524383 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
ABCA7-204ENST00000524383 DNAJC5Q9H3Z4 198 aa39.27■■■■□ 3.88
ABCA7-204ENST00000524383 NCAPD3P42695 1498 aa39.02■■■■□ 3.84
ABCA7-204ENST00000524383 ERCC6Q03468 1493 aa38.9■■■■□ 3.82
ABCA7-204ENST00000524383 CUX2O14529 1486 aa38.86■■■■□ 3.81
ABCA7-204ENST00000524383 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
ABCA7-204ENST00000524383 SMARCA2P51531 1590 aa38.74■■■■□ 3.79
ABCA7-204ENST00000524383 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
ABCA7-204ENST00000524383 HMGXB3Q12766 1538 aa38.67■■■■□ 3.78
ABCA7-204ENST00000524383 NESP48681 1621 aa38.53■■■■□ 3.76
ABCA7-204ENST00000524383 BAZ1AQ9NRL2 1556 aaPredicted RBP38.5■■■■□ 3.75
ABCA7-204ENST00000524383 BAZ1BQ9UIG0 1483 aaKnown RBP38.5■■■■□ 3.75
ABCA7-204ENST00000524383 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
ABCA7-204ENST00000524383 MROH2BQ7Z745 1585 aa38.19■■■■□ 3.7
ABCA7-204ENST00000524383 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
ABCA7-204ENST00000524383 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
ABCA7-204ENST00000524383 PDS5BQ9NTI5 1447 aa38.04■■■■□ 3.68
ABCA7-204ENST00000524383 KIF21AQ7Z4S6 1674 aa38■■■■□ 3.67
ABCA7-204ENST00000524383 CADPSQ9ULU8 1353 aa37.86■■■■□ 3.65
ABCA7-204ENST00000524383 WIZO95785 1651 aa37.73■■■■□ 3.63
ABCA7-204ENST00000524383 MRC2Q9UBG0 1479 aa37.69■■■■□ 3.62
ABCA7-204ENST00000524383 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
ABCA7-204ENST00000524383 WDR62O43379 1518 aa37.57■■■■□ 3.61
ABCA7-204ENST00000524383 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
ABCA7-204ENST00000524383 CEP164Q9UPV0 1460 aa37.49■■■■□ 3.59
ABCA7-204ENST00000524383 FANCD2Q9BXW9 1451 aa37.42■■■■□ 3.58
ABCA7-204ENST00000524383 CFTRP13569 1480 aa37.32■■■■□ 3.56
ABCA7-204ENST00000524383 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
ABCA7-204ENST00000524383 OSCARQ8IYS5 282 aa37.15■■■■□ 3.54
ABCA7-204ENST00000524383 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
ABCA7-204ENST00000524383 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
ABCA7-204ENST00000524383 CCDC88BA6NC98 1476 aa36.83■■■■□ 3.49
ABCA7-204ENST00000524383 IFT140Q96RY7 1462 aa36.75■■■■□ 3.47
ABCA7-204ENST00000524383 ZNF608Q9ULD9 1512 aaPredicted RBP36.72■■■■□ 3.47
ABCA7-204ENST00000524383 TOPBP1Q92547 1522 aa36.66■■■■□ 3.46
ABCA7-204ENST00000524383 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
ABCA7-204ENST00000524383 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
ABCA7-204ENST00000524383 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
ABCA7-204ENST00000524383 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
ABCA7-204ENST00000524383 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
ABCA7-204ENST00000524383 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
ABCA7-204ENST00000524383 EIF4G3O43432 1585 aaKnown RBP36.47■■■■□ 3.43
ABCA7-204ENST00000524383 ARHGEF11O15085 1522 aa36.45■■■■□ 3.43
ABCA7-204ENST00000524383 AQRO60306 1485 aaKnown RBP eCLIP36.38■■■■□ 3.416e-10■■■■■ 53.7
ABCA7-204ENST00000524383 FBLN2P98095 1184 aa36.32■■■■□ 3.4
ABCA7-204ENST00000524383 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.4
ABCA7-204ENST00000524383 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.4
ABCA7-204ENST00000524383 CHD1O14646 1710 aa36.28■■■■□ 3.4
ABCA7-204ENST00000524383 POLA1P09884 1462 aaPredicted RBP36.26■■■■□ 3.4
ABCA7-204ENST00000524383 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
ABCA7-204ENST00000524383 SOGA1O94964 1423 aa36.15■■■■□ 3.38
ABCA7-204ENST00000524383 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
ABCA7-204ENST00000524383 TRHP20396 242 aaPredicted RBP36.06■■■■□ 3.36
ABCA7-204ENST00000524383 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
ABCA7-204ENST00000524383 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
ABCA7-204ENST00000524383 SNAPC4Q5SXM2 1469 aa35.98■■■■□ 3.35
ABCA7-204ENST00000524383 CHMP7Q8WUX9 453 aaPredicted RBP35.97■■■■□ 3.35
ABCA7-204ENST00000524383 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
ABCA7-204ENST00000524383 CUX1P39880 1505 aa35.89■■■■□ 3.34
ABCA7-204ENST00000524383 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
ABCA7-204ENST00000524383 GRIN2BQ13224 1484 aa35.84■■■■□ 3.33
ABCA7-204ENST00000524383 SYNJ1O43426 1573 aa35.83■■■■□ 3.33
ABCA7-204ENST00000524383 CLASP1Q7Z460 1538 aa35.82■■■■□ 3.32
ABCA7-204ENST00000524383 SYNJ2O15056 1496 aa35.75■■■■□ 3.31
ABCA7-204ENST00000524383 GAPVD1Q14C86 1478 aa35.67■■■■□ 3.3
ABCA7-204ENST00000524383 PBRM1Q86U86 1689 aa35.64■■■■□ 3.3
ABCA7-204ENST00000524383 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
ABCA7-204ENST00000524383 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
ABCA7-204ENST00000524383 WRNQ14191 1432 aaPredicted RBP eCLIP35.46■■■■□ 3.27
ABCA7-204ENST00000524383 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
ABCA7-204ENST00000524383 GRIN2AQ12879 1464 aa35.36■■■■□ 3.25
ABCA7-204ENST00000524383 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
ABCA7-204ENST00000524383 ERCC6L2Q5T890 1561 aa35.27■■■■□ 3.24
ABCA7-204ENST00000524383 AEBP2Q6ZN18 517 aaPredicted RBP35.27■■■■□ 3.24
ABCA7-204ENST00000524383 ADAMTS12P58397 1594 aa35.26■■■■□ 3.24
ABCA7-204ENST00000524383 NUP160Q12769 1436 aa35.23■■■■□ 3.23
ABCA7-204ENST00000524383 CEP170Q5SW79 1584 aa35.23■■■■□ 3.23
ABCA7-204ENST00000524383 FHAD1B1AJZ9 1412 aa35.21■■■■□ 3.23
ABCA7-204ENST00000524383 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
ABCA7-204ENST00000524383 SHROOM2Q13796 1616 aa35.09■■■■□ 3.21
ABCA7-204ENST00000524383 PRG4Q92954 1404 aaPredicted RBP34.99■■■■□ 3.19
ABCA7-204ENST00000524383 JPH4Q96JJ6 628 aa34.97■■■■□ 3.19
ABCA7-204ENST00000524383 KIF13AQ9H1H9 1805 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms