RNA–Protein interactions for RNA: ENST00000474481.1

ATAD3B-204, Transcript of ATPase family, AAA domain containing 3B, humanhuman

TSL 2

Gene ATAD3B, Length 3,367 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-204ENST00000474481 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
ATAD3B-204ENST00000474481 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
ATAD3B-204ENST00000474481 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
ATAD3B-204ENST00000474481 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
ATAD3B-204ENST00000474481 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
ATAD3B-204ENST00000474481 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
ATAD3B-204ENST00000474481 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
ATAD3B-204ENST00000474481 NACADO15069 1562 aa25.64■■□□□ 1.7
ATAD3B-204ENST00000474481 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
ATAD3B-204ENST00000474481 ABCC9O60706 1549 aa25.53■■□□□ 1.68
ATAD3B-204ENST00000474481 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
ATAD3B-204ENST00000474481 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
ATAD3B-204ENST00000474481 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.6
ATAD3B-204ENST00000474481 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
ATAD3B-204ENST00000474481 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
ATAD3B-204ENST00000474481 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
ATAD3B-204ENST00000474481 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
ATAD3B-204ENST00000474481 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
ATAD3B-204ENST00000474481 WIZO95785 1651 aa24.68■■□□□ 1.54
ATAD3B-204ENST00000474481 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
ATAD3B-204ENST00000474481 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
ATAD3B-204ENST00000474481 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
ATAD3B-204ENST00000474481 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
ATAD3B-204ENST00000474481 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
ATAD3B-204ENST00000474481 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
ATAD3B-204ENST00000474481 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
ATAD3B-204ENST00000474481 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.449e-7■■■■■ 28.2
ATAD3B-204ENST00000474481 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
ATAD3B-204ENST00000474481 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.43
ATAD3B-204ENST00000474481 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
ATAD3B-204ENST00000474481 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
ATAD3B-204ENST00000474481 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
ATAD3B-204ENST00000474481 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
ATAD3B-204ENST00000474481 NCAPD3P42695 1498 aa23.64■■□□□ 1.38
ATAD3B-204ENST00000474481 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
ATAD3B-204ENST00000474481 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
ATAD3B-204ENST00000474481 EEA1Q15075 1411 aa23.52■■□□□ 1.36
ATAD3B-204ENST00000474481 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.35
ATAD3B-204ENST00000474481 SOGA1O94964 1423 aa23.45■■□□□ 1.34
ATAD3B-204ENST00000474481 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
ATAD3B-204ENST00000474481 PCGF6Q9BYE7 350 aa23.42■■□□□ 1.34
ATAD3B-204ENST00000474481 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
ATAD3B-204ENST00000474481 TOP2BQ02880 1626 aa23.4■■□□□ 1.34
ATAD3B-204ENST00000474481 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
ATAD3B-204ENST00000474481 HRCP23327 699 aa23.35■■□□□ 1.33
ATAD3B-204ENST00000474481 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
ATAD3B-204ENST00000474481 KIF21BO75037 1637 aa23.31■■□□□ 1.32
ATAD3B-204ENST00000474481 CFTRP13569 1480 aa23.29■■□□□ 1.32
ATAD3B-204ENST00000474481 TNIKQ9UKE5 1360 aa23.26■■□□□ 1.31
ATAD3B-204ENST00000474481 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
ATAD3B-204ENST00000474481 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
ATAD3B-204ENST00000474481 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
ATAD3B-204ENST00000474481 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
ATAD3B-204ENST00000474481 CUX1P39880 1505 aa23.16■■□□□ 1.3
ATAD3B-204ENST00000474481 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
ATAD3B-204ENST00000474481 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
ATAD3B-204ENST00000474481 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
ATAD3B-204ENST00000474481 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
ATAD3B-204ENST00000474481 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
ATAD3B-204ENST00000474481 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
ATAD3B-204ENST00000474481 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
ATAD3B-204ENST00000474481 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
ATAD3B-204ENST00000474481 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
ATAD3B-204ENST00000474481 CLIP1P30622 1438 aa22.81■■□□□ 1.24
ATAD3B-204ENST00000474481 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
ATAD3B-204ENST00000474481 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.23
ATAD3B-204ENST00000474481 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
ATAD3B-204ENST00000474481 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
ATAD3B-204ENST00000474481 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
ATAD3B-204ENST00000474481 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
ATAD3B-204ENST00000474481 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
ATAD3B-204ENST00000474481 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
ATAD3B-204ENST00000474481 NESP48681 1621 aa22.65■■□□□ 1.22
ATAD3B-204ENST00000474481 CUX2O14529 1486 aa22.64■■□□□ 1.22
ATAD3B-204ENST00000474481 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
ATAD3B-204ENST00000474481 IGF1RP08069 1367 aa22.62■■□□□ 1.21
ATAD3B-204ENST00000474481 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
ATAD3B-204ENST00000474481 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
ATAD3B-204ENST00000474481 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
ATAD3B-204ENST00000474481 CUL7Q14999 1698 aa22.51■■□□□ 1.19
ATAD3B-204ENST00000474481 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
ATAD3B-204ENST00000474481 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
ATAD3B-204ENST00000474481 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
ATAD3B-204ENST00000474481 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
ATAD3B-204ENST00000474481 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.19
ATAD3B-204ENST00000474481 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
ATAD3B-204ENST00000474481 CTTNBP2Q8WZ74 1663 aa22.4■■□□□ 1.18
ATAD3B-204ENST00000474481 MAP3K1Q13233 1512 aa22.37■■□□□ 1.17
ATAD3B-204ENST00000474481 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
ATAD3B-204ENST00000474481 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
ATAD3B-204ENST00000474481 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
ATAD3B-204ENST00000474481 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
ATAD3B-204ENST00000474481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
ATAD3B-204ENST00000474481 CFAP43Q8NDM7 1665 aa22.27■■□□□ 1.16
ATAD3B-204ENST00000474481 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
ATAD3B-204ENST00000474481 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
ATAD3B-204ENST00000474481 APLP2Q06481 763 aa22.23■■□□□ 1.15
ATAD3B-204ENST00000474481 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
ATAD3B-204ENST00000474481 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
ATAD3B-204ENST00000474481 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms