Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TM4SF20Q53R12 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.51■□□□□ 0.87
TM4SF20Q53R12 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF20Q53R12 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF20Q53R12 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF20Q53R12 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TM4SF20Q53R12 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF20Q53R12 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF20Q53R12 SUZ12P1-203ENST00000578195 985 ntBASIC20.48■□□□□ 0.87
TM4SF20Q53R12 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF20Q53R12 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF20Q53R12 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM4SF20Q53R12 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.45■□□□□ 0.86
TM4SF20Q53R12 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF20Q53R12 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF20Q53R12 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.43■□□□□ 0.86
TM4SF20Q53R12 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF20Q53R12 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.42■□□□□ 0.86
TM4SF20Q53R12 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF20Q53R12 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF20Q53R12 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF20Q53R12 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF20Q53R12 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.4■□□□□ 0.86
TM4SF20Q53R12 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TM4SF20Q53R12 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TM4SF20Q53R12 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF20Q53R12 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TM4SF20Q53R12 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.39■□□□□ 0.85
TM4SF20Q53R12 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF20Q53R12 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TM4SF20Q53R12 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF20Q53R12 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF20Q53R12 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF20Q53R12 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF20Q53R12 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF20Q53R12 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF20Q53R12 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF20Q53R12 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF20Q53R12 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF20Q53R12 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF20Q53R12 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TM4SF20Q53R12 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF20Q53R12 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF20Q53R12 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF20Q53R12 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF20Q53R12 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF20Q53R12 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TM4SF20Q53R12 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TM4SF20Q53R12 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF20Q53R12 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF20Q53R12 MIR762-201ENST00000390236 83 ntBASIC20.32■□□□□ 0.84
TM4SF20Q53R12 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF20Q53R12 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF20Q53R12 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF20Q53R12 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF20Q53R12 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF20Q53R12 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.3■□□□□ 0.84
TM4SF20Q53R12 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.29■□□□□ 0.84
TM4SF20Q53R12 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TM4SF20Q53R12 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF20Q53R12 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM4SF20Q53R12 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.29■□□□□ 0.84
TM4SF20Q53R12 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF20Q53R12 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF20Q53R12 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF20Q53R12 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF20Q53R12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF20Q53R12 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF20Q53R12 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF20Q53R12 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF20Q53R12 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF20Q53R12 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TM4SF20Q53R12 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF20Q53R12 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.23■□□□□ 0.83
TM4SF20Q53R12 AC005559.1-201ENST00000589661 871 ntBASIC20.23■□□□□ 0.83
TM4SF20Q53R12 AL135925.1-201ENST00000605920 1701 ntBASIC20.23■□□□□ 0.83
TM4SF20Q53R12 ABCB10P1-201ENST00000614297 2181 ntBASIC20.23■□□□□ 0.83
TM4SF20Q53R12 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.23■□□□□ 0.83
TM4SF20Q53R12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF20Q53R12 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM4SF20Q53R12 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms