Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPP3CBP16298 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP3CBP16298 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.67■■□□□ 1.38
PPP3CBP16298 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP3CBP16298 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP3CBP16298 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP3CBP16298 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPP3CBP16298 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PPP3CBP16298 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP3CBP16298 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP3CBP16298 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP3CBP16298 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.63■■□□□ 1.37
PPP3CBP16298 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
PPP3CBP16298 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PPP3CBP16298 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP3CBP16298 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP3CBP16298 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP3CBP16298 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.61■■□□□ 1.37
PPP3CBP16298 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP3CBP16298 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP3CBP16298 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP3CBP16298 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP3CBP16298 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP3CBP16298 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP3CBP16298 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP3CBP16298 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PPP3CBP16298 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP3CBP16298 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP3CBP16298 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP3CBP16298 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP3CBP16298 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP3CBP16298 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP3CBP16298 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP3CBP16298 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP3CBP16298 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP3CBP16298 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PPP3CBP16298 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP3CBP16298 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PPP3CBP16298 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP3CBP16298 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP3CBP16298 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP3CBP16298 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP3CBP16298 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP3CBP16298 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP3CBP16298 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP3CBP16298 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP3CBP16298 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP3CBP16298 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP3CBP16298 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP3CBP16298 ABHD17AP4-201ENST00000411545 909 ntBASIC23.5■■□□□ 1.35
PPP3CBP16298 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.5■■□□□ 1.35
PPP3CBP16298 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PPP3CBP16298 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
PPP3CBP16298 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PPP3CBP16298 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PPP3CBP16298 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP3CBP16298 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.47■■□□□ 1.35
PPP3CBP16298 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP3CBP16298 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PPP3CBP16298 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PPP3CBP16298 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.46■■□□□ 1.35
PPP3CBP16298 AC139426.1-201ENST00000568218 2529 ntBASIC23.46■■□□□ 1.35
PPP3CBP16298 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.44■■□□□ 1.34
PPP3CBP16298 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP3CBP16298 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PPP3CBP16298 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP3CBP16298 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP3CBP16298 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP3CBP16298 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.42■■□□□ 1.34
PPP3CBP16298 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.42■■□□□ 1.34
PPP3CBP16298 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.42■■□□□ 1.34
PPP3CBP16298 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PPP3CBP16298 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP3CBP16298 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP3CBP16298 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.41■■□□□ 1.34
PPP3CBP16298 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP3CBP16298 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.4■■□□□ 1.34
PPP3CBP16298 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP3CBP16298 MIR7108-201ENST00000614319 87 ntBASIC23.4■■□□□ 1.34
PPP3CBP16298 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP3CBP16298 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PPP3CBP16298 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PPP3CBP16298 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PPP3CBP16298 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.39■■□□□ 1.33
PPP3CBP16298 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
PPP3CBP16298 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PPP3CBP16298 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP3CBP16298 AC120057.4-201ENST00000624722 1615 ntBASIC23.37■■□□□ 1.33
PPP3CBP16298 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.37■■□□□ 1.33
PPP3CBP16298 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.36■■□□□ 1.33
PPP3CBP16298 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.36■■□□□ 1.33
PPP3CBP16298 AC108673.1-201ENST00000510422 1159 ntBASIC23.36■■□□□ 1.33
PPP3CBP16298 ABCB10P1-201ENST00000614297 2181 ntBASIC23.35■■□□□ 1.33
PPP3CBP16298 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PPP3CBP16298 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP3CBP16298 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PPP3CBP16298 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP3CBP16298 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP3CBP16298 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP3CBP16298 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms