Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINGO3P0C6S8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.57■■□□□ 1.68
LINGO3P0C6S8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.56■■□□□ 1.68
LINGO3P0C6S8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.56■■□□□ 1.68
LINGO3P0C6S8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LINGO3P0C6S8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LINGO3P0C6S8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
LINGO3P0C6S8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINGO3P0C6S8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINGO3P0C6S8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
LINGO3P0C6S8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.54■■□□□ 1.68
LINGO3P0C6S8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINGO3P0C6S8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
LINGO3P0C6S8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
LINGO3P0C6S8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.51■■□□□ 1.67
LINGO3P0C6S8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.5■■□□□ 1.67
LINGO3P0C6S8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LINGO3P0C6S8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.49■■□□□ 1.67
LINGO3P0C6S8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.49■■□□□ 1.67
LINGO3P0C6S8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LINGO3P0C6S8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LINGO3P0C6S8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.48■■□□□ 1.67
LINGO3P0C6S8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LINGO3P0C6S8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
LINGO3P0C6S8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LINGO3P0C6S8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.46■■□□□ 1.67
LINGO3P0C6S8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
LINGO3P0C6S8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
LINGO3P0C6S8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
LINGO3P0C6S8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LINGO3P0C6S8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
LINGO3P0C6S8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.43■■□□□ 1.66
LINGO3P0C6S8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LINGO3P0C6S8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
LINGO3P0C6S8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.42■■□□□ 1.66
LINGO3P0C6S8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
LINGO3P0C6S8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.41■■□□□ 1.66
LINGO3P0C6S8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.41■■□□□ 1.66
LINGO3P0C6S8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.41■■□□□ 1.66
LINGO3P0C6S8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LINGO3P0C6S8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LINGO3P0C6S8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.38■■□□□ 1.65
LINGO3P0C6S8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.38■■□□□ 1.65
LINGO3P0C6S8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LINGO3P0C6S8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LINGO3P0C6S8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
LINGO3P0C6S8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
LINGO3P0C6S8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LINGO3P0C6S8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LINGO3P0C6S8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.36■■□□□ 1.65
LINGO3P0C6S8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LINGO3P0C6S8 AC142086.6-201ENST00000621154 1765 ntBASIC25.36■■□□□ 1.65
LINGO3P0C6S8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LINGO3P0C6S8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LINGO3P0C6S8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LINGO3P0C6S8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LINGO3P0C6S8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.34■■□□□ 1.65
LINGO3P0C6S8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LINGO3P0C6S8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINGO3P0C6S8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LINGO3P0C6S8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINGO3P0C6S8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
LINGO3P0C6S8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINGO3P0C6S8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINGO3P0C6S8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINGO3P0C6S8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.31■■□□□ 1.64
LINGO3P0C6S8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINGO3P0C6S8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINGO3P0C6S8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.29■■□□□ 1.64
LINGO3P0C6S8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINGO3P0C6S8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LINGO3P0C6S8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LINGO3P0C6S8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINGO3P0C6S8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.27■■□□□ 1.64
LINGO3P0C6S8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
LINGO3P0C6S8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINGO3P0C6S8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
LINGO3P0C6S8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LINGO3P0C6S8 AL121749.1-202ENST00000609313 2153 ntBASIC25.26■■□□□ 1.63
LINGO3P0C6S8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LINGO3P0C6S8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LINGO3P0C6S8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.25■■□□□ 1.63
LINGO3P0C6S8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
LINGO3P0C6S8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.24■■□□□ 1.63
LINGO3P0C6S8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LINGO3P0C6S8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LINGO3P0C6S8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LINGO3P0C6S8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.23■■□□□ 1.63
LINGO3P0C6S8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.23■■□□□ 1.63
LINGO3P0C6S8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LINGO3P0C6S8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LINGO3P0C6S8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
LINGO3P0C6S8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.21■■□□□ 1.63
LINGO3P0C6S8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LINGO3P0C6S8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms