Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HCN1O60741 AL161658.1-201ENST00000623641 1967 ntBASIC24.67■■□□□ 1.54
HCN1O60741 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HCN1O60741 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HCN1O60741 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HCN1O60741 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HCN1O60741 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.64■■□□□ 1.54
HCN1O60741 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HCN1O60741 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.64■■□□□ 1.54
HCN1O60741 MIR3665-201ENST00000578708 105 ntBASIC24.64■■□□□ 1.54
HCN1O60741 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HCN1O60741 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.63■■□□□ 1.53
HCN1O60741 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HCN1O60741 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
HCN1O60741 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HCN1O60741 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.61■■□□□ 1.53
HCN1O60741 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MIR762-201ENST00000390236 83 ntBASIC24.6■■□□□ 1.53
HCN1O60741 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.6■■□□□ 1.53
HCN1O60741 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
HCN1O60741 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HCN1O60741 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.59■■□□□ 1.53
HCN1O60741 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HCN1O60741 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HCN1O60741 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.56■■□□□ 1.52
HCN1O60741 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HCN1O60741 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HCN1O60741 ABCB10P1-201ENST00000614297 2181 ntBASIC24.56■■□□□ 1.52
HCN1O60741 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCN1O60741 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCN1O60741 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
HCN1O60741 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCN1O60741 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCN1O60741 AC005559.1-201ENST00000589661 871 ntBASIC24.53■■□□□ 1.52
HCN1O60741 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.52■■□□□ 1.52
HCN1O60741 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HCN1O60741 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
HCN1O60741 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HCN1O60741 DUX4L28-201ENST00000623687 678 ntBASIC24.5■■□□□ 1.51
HCN1O60741 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
HCN1O60741 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HCN1O60741 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
HCN1O60741 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
HCN1O60741 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.47■■□□□ 1.51
HCN1O60741 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 AC087741.3-201ENST00000624270 1347 ntBASIC24.46■■□□□ 1.51
HCN1O60741 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCN1O60741 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
HCN1O60741 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.46■■□□□ 1.51
HCN1O60741 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
HCN1O60741 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
HCN1O60741 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HCN1O60741 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.44■■□□□ 1.5
HCN1O60741 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
HCN1O60741 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HCN1O60741 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCN1O60741 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
HCN1O60741 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.41■■□□□ 1.5
HCN1O60741 AC044849.2-201ENST00000606596 710 ntBASIC24.41■■□□□ 1.5
HCN1O60741 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCN1O60741 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCN1O60741 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HCN1O60741 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
HCN1O60741 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HCN1O60741 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HCN1O60741 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
HCN1O60741 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
HCN1O60741 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.38■■□□□ 1.49
HCN1O60741 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
HCN1O60741 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HCN1O60741 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HCN1O60741 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HCN1O60741 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
HCN1O60741 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
HCN1O60741 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
HCN1O60741 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.34■■□□□ 1.49
HCN1O60741 ABCB10P3-201ENST00000561950 2166 ntBASIC24.34■■□□□ 1.49
HCN1O60741 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HCN1O60741 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms