Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HCN1O60741 AL161658.1-201ENST00000623641 1967 ntBASIC24.67■■□□□ 1.54
HCN1O60741 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HCN1O60741 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HCN1O60741 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HCN1O60741 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HCN1O60741 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.65■■□□□ 1.54
HCN1O60741 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.64■■□□□ 1.54
HCN1O60741 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HCN1O60741 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.64■■□□□ 1.54
HCN1O60741 MIR3665-201ENST00000578708 105 ntBASIC24.64■■□□□ 1.54
HCN1O60741 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HCN1O60741 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.63■■□□□ 1.53
HCN1O60741 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HCN1O60741 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HCN1O60741 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
HCN1O60741 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HCN1O60741 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.61■■□□□ 1.53
HCN1O60741 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MIR762-201ENST00000390236 83 ntBASIC24.6■■□□□ 1.53
HCN1O60741 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.6■■□□□ 1.53
HCN1O60741 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
HCN1O60741 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HCN1O60741 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HCN1O60741 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.59■■□□□ 1.53
HCN1O60741 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HCN1O60741 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HCN1O60741 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.56■■□□□ 1.52
HCN1O60741 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HCN1O60741 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HCN1O60741 ABCB10P1-201ENST00000614297 2181 ntBASIC24.56■■□□□ 1.52
HCN1O60741 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCN1O60741 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCN1O60741 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCN1O60741 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
HCN1O60741 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCN1O60741 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCN1O60741 AC005559.1-201ENST00000589661 871 ntBASIC24.53■■□□□ 1.52
HCN1O60741 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.52■■□□□ 1.52
HCN1O60741 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HCN1O60741 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
HCN1O60741 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HCN1O60741 DUX4L28-201ENST00000623687 678 ntBASIC24.5■■□□□ 1.51
HCN1O60741 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
HCN1O60741 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HCN1O60741 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
HCN1O60741 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
HCN1O60741 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.47■■□□□ 1.51
HCN1O60741 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCN1O60741 AC087741.3-201ENST00000624270 1347 ntBASIC24.46■■□□□ 1.51
HCN1O60741 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCN1O60741 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
HCN1O60741 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.46■■□□□ 1.51
HCN1O60741 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
HCN1O60741 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
HCN1O60741 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HCN1O60741 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.44■■□□□ 1.5
HCN1O60741 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
HCN1O60741 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HCN1O60741 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCN1O60741 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
HCN1O60741 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.41■■□□□ 1.5
HCN1O60741 AC044849.2-201ENST00000606596 710 ntBASIC24.41■■□□□ 1.5
HCN1O60741 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCN1O60741 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCN1O60741 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HCN1O60741 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
HCN1O60741 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HCN1O60741 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HCN1O60741 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
HCN1O60741 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
HCN1O60741 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.38■■□□□ 1.49
HCN1O60741 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
HCN1O60741 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HCN1O60741 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HCN1O60741 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HCN1O60741 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HCN1O60741 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
HCN1O60741 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HCN1O60741 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
HCN1O60741 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
HCN1O60741 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.34■■□□□ 1.49
HCN1O60741 ABCB10P3-201ENST00000561950 2166 ntBASIC24.34■■□□□ 1.49
HCN1O60741 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HCN1O60741 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms