Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PCDHGA12O60330 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA12O60330 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.51■■□□□ 1.83
PCDHGA12O60330 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA12O60330 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
PCDHGA12O60330 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGA12O60330 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA12O60330 AC021231.2-201ENST00000594613 730 ntBASIC26.48■■□□□ 1.83
PCDHGA12O60330 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA12O60330 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDHGA12O60330 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDHGA12O60330 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHGA12O60330 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.45■■□□□ 1.82
PCDHGA12O60330 MIR4449-201ENST00000578365 66 ntBASIC26.45■■□□□ 1.82
PCDHGA12O60330 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA12O60330 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA12O60330 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA12O60330 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHGA12O60330 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.44■■□□□ 1.82
PCDHGA12O60330 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA12O60330 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHGA12O60330 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGA12O60330 MIR639-201ENST00000384974 98 ntBASIC26.42■■□□□ 1.82
PCDHGA12O60330 AC108673.1-201ENST00000510422 1159 ntBASIC26.42■■□□□ 1.82
PCDHGA12O60330 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGA12O60330 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.41■■□□□ 1.82
PCDHGA12O60330 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.41■■□□□ 1.82
PCDHGA12O60330 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PCDHGA12O60330 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.4■■□□□ 1.82
PCDHGA12O60330 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.4■■□□□ 1.82
PCDHGA12O60330 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA12O60330 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA12O60330 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
PCDHGA12O60330 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA12O60330 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA12O60330 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA12O60330 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDHGA12O60330 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA12O60330 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA12O60330 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
PCDHGA12O60330 MIR6090-201ENST00000622481 60 ntBASIC26.34■■□□□ 1.81
PCDHGA12O60330 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA12O60330 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGA12O60330 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHGA12O60330 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGA12O60330 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PCDHGA12O60330 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHGA12O60330 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHGA12O60330 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA12O60330 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA12O60330 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA12O60330 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHGA12O60330 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDHGA12O60330 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHGA12O60330 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA12O60330 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA12O60330 MIR3648-2-201ENST00000581792 180 ntBASIC26.3■■□□□ 1.8
PCDHGA12O60330 MIR3648-1-201ENST00000615959 180 ntBASIC26.3■■□□□ 1.8
PCDHGA12O60330 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHGA12O60330 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA12O60330 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA12O60330 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGA12O60330 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.27■■□□□ 1.8
PCDHGA12O60330 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA12O60330 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.26■■□□□ 1.79
PCDHGA12O60330 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHGA12O60330 AC016575.1-201ENST00000607026 382 ntBASIC26.26■■□□□ 1.79
PCDHGA12O60330 LINC01971-201ENST00000617888 1048 ntBASIC26.26■■□□□ 1.79
PCDHGA12O60330 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
PCDHGA12O60330 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA12O60330 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PCDHGA12O60330 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHGA12O60330 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHGA12O60330 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHGA12O60330 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA12O60330 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA12O60330 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
PCDHGA12O60330 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA12O60330 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA12O60330 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA12O60330 DUX4L11-201ENST00000611504 1267 ntBASIC26.22■■□□□ 1.79
PCDHGA12O60330 DUX4L12-201ENST00000614593 1267 ntBASIC26.22■■□□□ 1.79
PCDHGA12O60330 DUX4L14-201ENST00000621227 1267 ntBASIC26.22■■□□□ 1.79
PCDHGA12O60330 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA12O60330 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA12O60330 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA12O60330 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA12O60330 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA12O60330 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
PCDHGA12O60330 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA12O60330 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA12O60330 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PCDHGA12O60330 CR559946.2-201ENST00000623684 991 ntBASIC26.17■■□□□ 1.78
PCDHGA12O60330 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA12O60330 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHGA12O60330 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA12O60330 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PCDHGA12O60330 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA12O60330 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA12O60330 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms