Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV8-6A0A0B4J262 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV8-6A0A0B4J262 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.29■□□□□ 0.68
TRAV8-6A0A0B4J262 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV8-6A0A0B4J262 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV8-6A0A0B4J262 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-6A0A0B4J262 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-6A0A0B4J262 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-6A0A0B4J262 AL031258.1-201ENST00000623562 325 ntBASIC19.28■□□□□ 0.68
TRAV8-6A0A0B4J262 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-6A0A0B4J262 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV8-6A0A0B4J262 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-6A0A0B4J262 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRAV8-6A0A0B4J262 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV8-6A0A0B4J262 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-6A0A0B4J262 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRAV8-6A0A0B4J262 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-6A0A0B4J262 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV8-6A0A0B4J262 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV8-6A0A0B4J262 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV8-6A0A0B4J262 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV8-6A0A0B4J262 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-6A0A0B4J262 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-6A0A0B4J262 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-6A0A0B4J262 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-6A0A0B4J262 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV8-6A0A0B4J262 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV8-6A0A0B4J262 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-6A0A0B4J262 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-6A0A0B4J262 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
TRAV8-6A0A0B4J262 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-6A0A0B4J262 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-6A0A0B4J262 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-6A0A0B4J262 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-6A0A0B4J262 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV8-6A0A0B4J262 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRAV8-6A0A0B4J262 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-6A0A0B4J262 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-6A0A0B4J262 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-6A0A0B4J262 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
TRAV8-6A0A0B4J262 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV8-6A0A0B4J262 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV8-6A0A0B4J262 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-6A0A0B4J262 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV8-6A0A0B4J262 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-6A0A0B4J262 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-6A0A0B4J262 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRAV8-6A0A0B4J262 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-6A0A0B4J262 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-6A0A0B4J262 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-6A0A0B4J262 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-6A0A0B4J262 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-6A0A0B4J262 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-6A0A0B4J262 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-6A0A0B4J262 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV8-6A0A0B4J262 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV8-6A0A0B4J262 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV8-6A0A0B4J262 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV8-6A0A0B4J262 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-6A0A0B4J262 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-6A0A0B4J262 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV8-6A0A0B4J262 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV8-6A0A0B4J262 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV8-6A0A0B4J262 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV8-6A0A0B4J262 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV8-6A0A0B4J262 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
TRAV8-6A0A0B4J262 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV8-6A0A0B4J262 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-6A0A0B4J262 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV8-6A0A0B4J262 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-6A0A0B4J262 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-6A0A0B4J262 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-6A0A0B4J262 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-6A0A0B4J262 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV8-6A0A0B4J262 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV8-6A0A0B4J262 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV8-6A0A0B4J262 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-6A0A0B4J262 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV8-6A0A0B4J262 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-6A0A0B4J262 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms