Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 FEM1AP1-201ENST00000431297 1995 ntBASIC18.69■□□□□ 0.58
COPS3Q9UNS2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS3Q9UNS2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COPS3Q9UNS2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 SMUG1P1-201ENST00000590640 811 ntBASIC18.66■□□□□ 0.58
COPS3Q9UNS2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS3Q9UNS2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS3Q9UNS2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPS3Q9UNS2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
COPS3Q9UNS2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COPS3Q9UNS2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COPS3Q9UNS2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPS3Q9UNS2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
COPS3Q9UNS2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms