Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 AC004448.1-201ENST00000458332 883 ntBASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 AC022616.5-201ENST00000518796 181 ntBASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 AC009831.1-201ENST00000580420 1582 ntBASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CROCCP1-201ENST00000426910 5675 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 LONRF2P2-201ENST00000439212 571 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CA15P2-201ENST00000611168 834 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 MIR6765-201ENST00000614092 87 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 AC120498.9-201ENST00000339021 3867 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms