Protein–RNA interactions for Protein: Q8N1A0

KRT222, Keratin-like protein KRT222, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT222Q8N1A0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 GUSBP5-201ENST00000418136 578 ntBASIC22.33■■□□□ 1.17
KRT222Q8N1A0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRT222Q8N1A0 LETM1P2-201ENST00000597330 2178 ntBASIC22.33■■□□□ 1.16
KRT222Q8N1A0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
KRT222Q8N1A0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KRT222Q8N1A0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
KRT222Q8N1A0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KRT222Q8N1A0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 AC098818.2-201ENST00000564925 2320 ntBASIC22.32■■□□□ 1.16
KRT222Q8N1A0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KRT222Q8N1A0 AC005703.6-201ENST00000623265 1329 ntBASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT222Q8N1A0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT222Q8N1A0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT222Q8N1A0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 KRT16P3-201ENST00000439127 1283 ntBASIC22.28■■□□□ 1.16
KRT222Q8N1A0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT222Q8N1A0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
KRT222Q8N1A0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
KRT222Q8N1A0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
KRT222Q8N1A0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT222Q8N1A0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT222Q8N1A0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms