Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE9Q8IYJ1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.77■□□□□ 0.91
CPNE9Q8IYJ1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 AC073130.3-201ENST00000624389 2278 ntBASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 AC027612.3-201ENST00000413684 1047 ntBASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE9Q8IYJ1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 RNF165-205ENST00000588679 2904 ntBASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE9Q8IYJ1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE9Q8IYJ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CPNE9Q8IYJ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE9Q8IYJ1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE9Q8IYJ1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms