Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-7A0A0A0MS04 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV6-7A0A0A0MS04 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-7A0A0A0MS04 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-7A0A0A0MS04 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV6-7A0A0A0MS04 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 AL049796.1-201ENST00000565336 1766 ntBASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV6-7A0A0A0MS04 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-7A0A0A0MS04 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 AP006587.3-201ENST00000525742 1516 ntBASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-7A0A0A0MS04 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-7A0A0A0MS04 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 AP005212.1-201ENST00000581547 1997 ntBASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms