Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.39■■□□□ 1.02
LRRC40Q9H9A6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRRC40Q9H9A6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRRC40Q9H9A6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 AC105265.2-201ENST00000467189 838 ntBASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC40Q9H9A6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 IRS3P-201ENST00000223076 1006 ntBASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC40Q9H9A6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC40Q9H9A6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC40Q9H9A6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 MIR6084-201ENST00000622012 110 ntBASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRC40Q9H9A6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRC40Q9H9A6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms