Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 LSM12P1-201ENST00000411836 588 ntBASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 AC087742.1-201ENST00000575880 1738 ntBASIC20.05■□□□□ 0.8
CCDC187A0A096LP49 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AC061975.6-201ENST00000579045 1553 ntBASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AL158047.1-201ENST00000445918 881 ntBASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AC128676.1-201ENST00000454392 318 ntBASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AC142381.4-202ENST00000563973 229 ntBASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC187A0A096LP49 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC187A0A096LP49 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 AC026366.1-201ENST00000488803 879 ntBASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 UNC93B5-201ENST00000530315 699 ntBASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 AC139530.1-201ENST00000575312 1977 ntBASIC20.02■□□□□ 0.8
CCDC187A0A096LP49 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC187A0A096LP49 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CCDC187A0A096LP49 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC187A0A096LP49 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC187A0A096LP49 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 AP003097.1-201ENST00000530657 1135 ntBASIC20■□□□□ 0.79
CCDC187A0A096LP49 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms