Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EBF1Q9UH73 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF1Q9UH73 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF1Q9UH73 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EBF1Q9UH73 AC007322.4-201ENST00000509611 723 ntBASIC21.53■■□□□ 1.04
EBF1Q9UH73 AC098934.4-201ENST00000564127 592 ntBASIC21.53■■□□□ 1.04
EBF1Q9UH73 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF1Q9UH73 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF1Q9UH73 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
EBF1Q9UH73 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
EBF1Q9UH73 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EBF1Q9UH73 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
EBF1Q9UH73 LINC00526-201ENST00000581067 1875 ntBASIC21.52■■□□□ 1.04
EBF1Q9UH73 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EBF1Q9UH73 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 POU5F1P3-201ENST00000428824 1078 ntBASIC21.52■■□□□ 1.04
EBF1Q9UH73 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.52■■□□□ 1.04
EBF1Q9UH73 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 ITM2C-210ENST00000620962 501 ntBASIC21.52■■□□□ 1.04
EBF1Q9UH73 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.52■■□□□ 1.04
EBF1Q9UH73 AC068338.2-201ENST00000563278 1430 ntBASIC21.52■■□□□ 1.04
EBF1Q9UH73 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EBF1Q9UH73 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 EEF1DP3-203ENST00000566025 782 ntBASIC21.51■■□□□ 1.03
EBF1Q9UH73 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
EBF1Q9UH73 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EBF1Q9UH73 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EBF1Q9UH73 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EBF1Q9UH73 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EBF1Q9UH73 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 MIPEPP3-201ENST00000412105 444 ntBASIC21.5■■□□□ 1.03
EBF1Q9UH73 AL034346.1-201ENST00000568244 1277 ntBASIC21.5■■□□□ 1.03
EBF1Q9UH73 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EBF1Q9UH73 AC008687.6-201ENST00000596318 630 ntBASIC21.5■■□□□ 1.03
EBF1Q9UH73 OR10C1-204ENST00000622521 1039 ntBASIC21.5■■□□□ 1.03
EBF1Q9UH73 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EBF1Q9UH73 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EBF1Q9UH73 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 OR7E47P-201ENST00000546390 1422 ntBASIC21.49■■□□□ 1.03
EBF1Q9UH73 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.49■■□□□ 1.03
EBF1Q9UH73 CYP2T1P-201ENST00000432607 1285 ntBASIC21.49■■□□□ 1.03
EBF1Q9UH73 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 AC053503.5-201ENST00000601508 636 ntBASIC21.49■■□□□ 1.03
EBF1Q9UH73 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
EBF1Q9UH73 MKRN4P-201ENST00000444706 1521 ntBASIC21.49■■□□□ 1.03
EBF1Q9UH73 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
EBF1Q9UH73 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 515.6 ms