Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 MIR219A2-201ENST00000608502 1504 ntBASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMCO4Q9NRQ5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 AC116562.4-201ENST00000641316 2276 ntBASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMCO4Q9NRQ5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMCO4Q9NRQ5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 AL022069.1-201ENST00000568025 1636 ntBASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMCO4Q9NRQ5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 NEFHP1-201ENST00000412845 2629 ntBASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
SMCO4Q9NRQ5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMCO4Q9NRQ5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms